Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tetmemena_20sp._20SeJ-2015_20[genbank_20GCA_5F001273295.2_202015-12- 23] 25,219 sequences; 60,638,083 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq22248 147 6e-33 >seq22248 Length=2326 Score = 147 bits (162), Expect = 6e-33 Identities = 193/267 (72%), Gaps = 8/267 (3%) Strand=Plus/Plus Query 13 GCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGTT 72 |||| ||||| || ||||||||||| || | ||||||| | || ||||| Sbjct 543 GCATTTTCACCTAGAATTCAATTTCACCGAAATATAACTTGAGACAGTGAGGCAGTCGTT 602 Query 73 ACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 132 ||||||||| |||||| | ||||||||| | ||||||||||||||||||| ||||||| | Sbjct 603 ACGCCATTCATGCAGGACAGAACTTACCTGTCAAGGAATTTCGCTACCTTCGGACCGTCA 662 Query 133 TTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTAGCTAACCCCATC 192 ||||| |||||||||||| ||| || | || | || ||| ||| | Sbjct 663 GGGTTACAGCCGCCGTTTACTGGGATTTATACTAA----TAAGCTTTACCTA----TAGT 714 Query 193 AATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGTTTGCAG 252 || | ||| | |||| |||||||||||| || ||||| || || |||||| Sbjct 715 TTTTCATCTTACAGCACTGGGCAGGCGTCAGACTTTATACATCATTATTAAATTTTGCAA 774 Query 253 AGTGCTGTGTTTTTAATAAACAGTCGC 279 ||| ||||||||||| ||||||||||| Sbjct 775 AGTCCTGTGTTTTTAGTAAACAGTCGC 801 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1260482038848