Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tetmemena_20sp._20SeJ-2015_20[genbank_20GCA_5F001273295.2_202015-12- 23] 25,219 sequences; 60,638,083 total letters Query= AAMG01000753.1 Length=364 Score E Sequences producing significant alignments: (Bits) Value seq22248 161 2e-37 >seq22248 Length=2326 Score = 161 bits (178), Expect = 2e-37 Identities = 258/366 (70%), Gaps = 26/366 (7%) Strand=Plus/Plus Query 5 CGGCATCTTCACCGGGATTACAATTTCACCGAGTCTATTG-TTGAGACAGTGCCCAAATC 63 |||||| |||||| || | |||||||||||| ||| ||||||||||| | || Sbjct 541 CGGCATTTTCACCTAGAATTCAATTTCACCGAAA-TATAACTTGAGACAGTGAGGCAGTC 599 Query 64 GTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCG 123 |||||||| ||| ||| || | ||||||||| | ||||||||||||||||||| |||||| Sbjct 600 GTTACGCCATTCATGCAGGACAGAACTTACCTGTCAAGGAATTTCGCTACCTTCGGACCG 659 Query 124 TTATAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGATTGCTCTAACAGA 183 | | ||||| |||||||||||||||| ||| ||| | | || || | || Sbjct 660 TCAGGGTTACAGCCGCCGTTTACTGGGATTTA----TACTAATAAGCTTTACCT-ATAGT 714 Query 184 TCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTAG 243 | || | ||| |||||| ||||||||||||| |||||||| | | | || | Sbjct 715 T---TTTCATCTTACAGCACTGGGCAGGCGTCAGACTTTATACATCATTATTAAATTTTG 771 Query 244 CAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGCCTGT------ 297 || | ||||||||||| ||||||||||||| ||| || | | || | | Sbjct 772 CAAAGTCCTGTGTTTTTAGTAAACAGTCGCTACCTCCTTTTTTTAGTTGCTTTTTTTGAA 831 Query 298 --CA----TAGACA----GGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTT 347 || || ||| || | |||| | || ||||||||| || | ||||||||||| Sbjct 832 AACATTTGTAAACAAAACAGCCCTCCTTATTCCGAAGTTACGGAGTTAATTTGCCGAGTT 891 Query 348 CCTTAA 353 |||||| Sbjct 892 CCTTAA 897 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1062132073344