Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tetmemena_20sp._20SeJ-2015_20[genbank_20GCA_5F001273295.2_202015-12- 23] 25,219 sequences; 60,638,083 total letters Query= AAMG01000811.1 Length=502 Score E Sequences producing significant alignments: (Bits) Value seq23639 113 1e-22 >seq23639 Length=3153 Score = 113 bits (124), Expect = 1e-22 Identities = 151/207 (73%), Gaps = 5/207 (2%) Strand=Plus/Plus Query 283 CCGGAGGAAGGTGGGGACGACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACG 342 || ||||| | ||| || ||||| |||| ||| | || |||||||||||||| Sbjct 2798 CCTGAGGAGGCATGGGTTGAAGTCAAGTCATTATGGTCTAAATACGTTGGGCTACACACG 2857 Query 343 TGCTACAATGGACAATACAAAGGGCAGCGAAACCGCGAGGTC--AAGCAAATCCCATAAA 400 ||||||| | || ||||| | ||||| | |||| || ||||||||| ||| Sbjct 2858 CGCTACAAGGTTAAAAACAAATAGAAGCGA--CGGCGAAATCTGAAGCAAATCTGCAAAA 2915 Query 401 GTTGTTCTCAGTTCGGATTGTAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTA 460 || | ||||| |||||||| ||| |||||| ||| |||||| ||||||| ||||| Sbjct 2916 ATTAA-CAAAGTTCCGATTGTAGACTGAAACTCGTCTACATGAAGATGGAATCATTAGTA 2974 Query 461 ATCGTAGATCAGCATGCTACGGTGAAT 487 |||||| || | |||| |||||||||| Sbjct 2975 ATCGTAAATTACCATGTTACGGTGAAT 3001 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1503620706240