Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tetmemena_20sp._20SeJ-2015_20[genbank_20GCA_5F001273295.2_202015-12- 23] 25,219 sequences; 60,638,083 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq17561 295 1e-77 >seq17561 Length=7580 Score = 295 bits (326), Expect = 1e-77 Identities = 223/260 (86%), Gaps = 6/260 (2%) Strand=Plus/Plus Query 1 TACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 60 |||||| || | |||||||||||| |||||||||||||| ||||||||||||||||||| Sbjct 4334 TACTCGCTGTATGCGTCAGTGTAGCACGCGTGCGGCCCAGGACATCTAAGGGCATCACAG 4393 Query 61 ACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGC 120 ||||||||||||||||||||||| ||| | | | | ||||||||||||||| | | Sbjct 4394 ACCTGTTATTGCCTCAAACTTCC-TTGTGTTTAGTCACAAAGTCCCTCTAAGAAGTCGGG 4452 Query 121 CACCAACCATAGT--CGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAAT 178 | | ||| ||| | ||| |||| ||| ||||||||||||||||| |||||| Sbjct 4453 TTCG---CTTAGCAACGAATCGACTAGTTAGTAGGCTAAGGTCTCGTTCGTTAACGGAAT 4509 Query 179 TAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAA 238 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 4510 TAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAA 4569 Query 239 GAAAGAGCTATCAATCTGTC 258 |||||||||||||||||||| Sbjct 4570 GAAAGAGCTATCAATCTGTC 4589 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796605334539