Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tetmemena_20sp._20SeJ-2015_20[genbank_20GCA_5F001273295.2_202015-12- 23] 25,219 sequences; 60,638,083 total letters Query= AAMG01001138.1 Length=202 Score E Sequences producing significant alignments: (Bits) Value seq22248 87.8 2e-15 >seq22248 Length=2326 Score = 87.8 bits (96), Expect = 2e-15 Identities = 105/147 (71%), Gaps = 0/147 (0%) Strand=Plus/Plus Query 25 GGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAG 84 |||||||| |||||| | | ||||||| |||||| | | | ||||||||| || Sbjct 514 GGGTCTTTCCGTCCCGCTGATCTTTCTCGGCATTTTCACCTAGAATTCAATTTCACCGAA 573 Query 85 CTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCGA 144 | ||||||||| ||| |||||| |||||| | ||||||||| | Sbjct 574 ATATAACTTGAGACAGTGAGGCAGTCGTTACGCCATTCATGCAGGACAGAACTTACCTGT 633 Query 145 CAAGGAATTTCGCTACCTTAGGACCGT 171 ||||||||||||||||||| ||||||| Sbjct 634 CAAGGAATTTCGCTACCTTCGGACCGT 660 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547066314081