Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tetmemena_20sp._20SeJ-2015_20[genbank_20GCA_5F001273295.2_202015-12- 23] 25,219 sequences; 60,638,083 total letters Query= AAMG01001188.1 Length=621 Score E Sequences producing significant alignments: (Bits) Value seq24853 149 2e-33 >seq24853 Length=861 Score = 149 bits (164), Expect = 2e-33 Identities = 231/328 (70%), Gaps = 4/328 (1%) Strand=Plus/Minus Query 194 CCGTAGTCCAGGTCAGCCATGTGGGTACACACGCTGTTCAGGAAGTGACGGTCGTGAGAG 253 ||||| |||| ||| |||||||| ||||| || |||| ||||||||| || || ||| Sbjct 565 CCGTAATCCATGTCCGCCATGTGAGTACAGACTTGATTCAAGAAGTGACGATCATGCGAG 506 Query 254 ATGATGATCATCAGGCTGGA--ACGCTGGGTCAGGATATTTTCCAGCCAGCGGATGGTGT 311 ||||| |||||| | | | ||| || ||| | || ||| | ||| || || || | Sbjct 505 ATGATAATCATC--GTCGAATTACGTTGATTCAACACATCTTCTAACCAACGAATCGTAT 448 Query 312 TGATGTCCAAGTGGTTGGTCGGTTCGTCGAGCAACAGCACTTCAGGATCGGAAAACAGCG 371 |||||||||||| ||||| |||||||| || |||| | || |||| || |||| | Sbjct 447 TGATGTCCAAGTTATTGGTTGGTTCGTCCAGTAACAAAATATCTGGATTCGAGAACAAAG 388 Query 372 CCTGGGCCAGCAATACACGCAGCTTCCAGCCCGGGGACACTTCGCTCATCGGACCGAAGT 431 | || |||| || || |||| |||||||| || | || | |||| || | Sbjct 387 CTTGTGCCAATAACACGCGCAATTTCCAGCCTGGTGCTACCGCATTCATTAAGCCTTGAT 328 Query 432 GCTGCTCCAGCGGAATACCCAGACCCAGCAGCAGCTCACCGGCACGGGATTCGGCGGTGT 491 | || || || || |||| |||| ||||| ||||| ||||| | ||||||||||| Sbjct 327 GTTGTTCAGTTGGGATGCCCACGCCCAACAGCAATTCACCTGCACGTGCTTCGGCGGTGT 268 Query 492 AGCCGTCCATCTCGGCGAACTCGGTTTC 519 ||||||| || || |||| || ||| Sbjct 267 AGCCGTCATATTCAGCAAACTTGGCTTC 240 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1881110650524