Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tetmemena_20sp._20SeJ-2015_20[genbank_20GCA_5F001273295.2_202015-12- 23] 25,219 sequences; 60,638,083 total letters Query= AAMG01002055.1 Length=294 Score E Sequences producing significant alignments: (Bits) Value seq24869 116 6e-24 >seq24869 Length=804 Score = 116 bits (128), Expect = 6e-24 Identities = 102/126 (81%), Gaps = 1/126 (1%) Strand=Plus/Plus Query 102 AAGGCTTCTTAGTGGAATTTCCACGTTGCCCACTCGCTTCATGCGTTTTTTACCGGCCTT 161 || ||||||| ||||||| || || ||||||| | ||||| || || |||||||| || Sbjct 645 AATGCTTCTT-GTGGAATCTCTACAGAGCCCACTTGTTTCATACGCTTCTTACCGGCTTT 703 Query 162 TTGCTTCTCAAGCAGCTTGCGCTTACGGCTTACGTCACCGCCGTAGCATTTGGCCAGTAC 221 || |||||||| | ||||||||||||||| | ||||| |||||||| || |||| ||| Sbjct 704 CTGTTTCTCAAGTAACTTGCGCTTACGGCTGATATCACCACCGTAGCACTTCGCCAATAC 763 Query 222 GTTCTT 227 |||||| Sbjct 764 GTTCTT 769 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 838188563904