Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tetmemena_20sp._20SeJ-2015_20[genbank_20GCA_5F001273295.2_202015-12- 23] 25,219 sequences; 60,638,083 total letters Query= AAMG01002194.1 Length=319 Score E Sequences producing significant alignments: (Bits) Value seq22850 387 3e-105 >seq22850 Length=504 Score = 387 bits (428), Expect = 3e-105 Identities = 278/319 (87%), Gaps = 1/319 (0%) Strand=Plus/Plus Query 1 AGTGCACATGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATA 60 |||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 158 AGTGCATGTGGTGGATGCCTTGGCGATTACAGGCGAAGAAGGACGTAGTAGCTTGCGATA 217 Query 61 AGCTGCGGGGAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGC 120 ||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 218 AGCTGCGGGGAGTCGGCAAACAGACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGC 277 Query 121 CCTTTGGGTCATTGCATGCTGAATACATAGGTATGCAAAGCGAACGCGGCGAACTGAAAC 180 | | || |||||||| |||||||||||||| ||||||||||||| ||||||||||||| Sbjct 278 CGTAAGG-TCATTGCACACTGAATACATAGGTGTGCAAAGCGAACGTGGCGAACTGAAAC 336 Query 181 ATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAAAT 240 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 337 ATCTAAGTAGCTACAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAAAT 396 Query 241 GGGATGAGCCTTTACGAGATAGTTGAATTGATAGTGGAATCCTCTGGAAATAGGAGCCAT 300 |||| |||||| | | ||| || ||||| ||| |||||| ||||| Sbjct 397 GGGAAGAGCCTGCATAATTTAGCATCTTTAATAGTAGAACGGATTGGAAACTCCGGCCAT 456 Query 301 AGCGGGTGATAGCCCCGTA 319 || ||||||||||||| || Sbjct 457 AGAGGGTGATAGCCCCTTA 475 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 918168388704