Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tetmemena_20sp._20SeJ-2015_20[genbank_20GCA_5F001273295.2_202015-12- 23] 25,219 sequences; 60,638,083 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq17561 655 0.0 >seq17561 Length=7580 Score = 655 bits (726), Expect = 0.0 Identities = 467/528 (88%), Gaps = 6/528 (1%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| |||||| ||||||||||||||| |||| || ||||||||||||||||| Sbjct 871 CTTTTGGTCTACAAGAGATTTCTGTTCTCTTTGAGCTTACCCTAGGACACCTGCGTTATC 930 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 ||||||||||||||||||||||||||||||||||||||||| ||||| || || |||| Sbjct 931 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACTATGTCTTCCACATAGATC 990 Query 127 GGCCCGCGAAGGACCTT-AACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATTG 185 || || ||| ||| || |||| || | || | || || | || | | || | Sbjct 991 AGCA-GCAAAGCTGCTTTAAAGCCATAACCTC-TCAGAGA-GAGG-GCTCTACCTAATGG 1046 Query 186 ATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTT 245 | ||||||||| || || || |||||||||||||||| ||||| || | ||||||||| Sbjct 1047 AATAAGTAAAATGACCATGAGAGTAGTGGTATTTCACTGACGCCGTAAAG-CTCCCACTT 1105 Query 246 ATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTT 305 || ||||||||| || | |||||||||||||||||||||||||||||||||||||||||| Sbjct 1106 ATACTACACCTCCCAGGCCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTT 1165 Query 306 CTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGAT 365 ||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||| Sbjct 1166 CTTTCCCCGCTGATTGTGCCAAGCCCGTTCCCTTGGCTGTGGGTTCGCTAGATAGTAGAT 1225 Query 366 AGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCAT 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1226 AGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCAT 1285 Query 426 TTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTC 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1286 TTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTC 1345 Query 486 TTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 |||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 1346 TTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGTGTCAACA 1393 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1634787618912