Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tetmemena_20sp._20SeJ-2015_20[genbank_20GCA_5F001273295.2_202015-12- 23] 25,219 sequences; 60,638,083 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq17561 529 5e-148 >seq17561 Length=7580 Score = 529 bits (586), Expect = 5e-148 Identities = 401/466 (86%), Gaps = 9/466 (2%) Strand=Plus/Plus Query 43 TATTTATTGTCACTACCTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCC 102 ||||| ||||||||||||||| | ||| |||||||||||||| ||||||||||||||||| Sbjct 5332 TATTTCTTGTCACTACCTCCCTGAGTCAGGATTGGGTAATTTACGCGCCTGCTGCCTTCC 5391 Query 103 TTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTA 162 || |||||||||||||||||||||||||||||||||||||||||||||||| | |||||| Sbjct 5392 TTAGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATCCTCCGTTA 5451 Query 163 CCCGTTGATACCATGGTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTG 222 ||||| | ||||||||| ||| || ||||||||||||| |||| ||||||||| ||| Sbjct 5452 CCCGTGAAAGCCATGGTAGTCCAATACACTACCATCGAAAGCTGATGGGGCAGAAACTTG 5511 Query 223 AATGAACCATCGCCGGCTCAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCA-AGG 281 ||||| ||||| || ||| |||||||||||| | ||||||||||||||| || | Sbjct 5512 AATGATGTATCGCGAGC-AAAGCCCATGCGATTCGATCAGTTATTATGAATCATCACAAT 5570 Query 282 AGCCCCGAAGGGCGTTGGTTTTTTATCTAATAAATACACCCCTTCC--GAAGTCGGGGTT 339 || | ||| | ||| ||| |||||||||||||||| ||||||| ||||| || || Sbjct 5571 AGACACGAGGAATATTGATTTGTTATCTAATAAATACAGCCCTTCCTAAAAGTCAGGCTT 5630 Query 340 TTTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGT-ACTATCAAA 398 |||||||||||||||||||||||||||||||||||||||| || | | ||||||| Sbjct 5631 AACAGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTA--AATTTGATTATCAAA 5688 Query 399 TAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTA 458 ||||| ||||||| |||||||||||||||||||||||||||||| | |||||||||| Sbjct 5689 TAAACTATAACTGTTTTAATGAGCCATTCGCAGTTTCACTGTAT--AACACTTATACTTA 5746 Query 459 GACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 ||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 5747 GACATGCATGGCTTAGTCTTTGAGACAAGCATATGACTACTGGCAG 5792 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510019092224