Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tetmemena_20sp._20SeJ-2015_20[genbank_20GCA_5F001273295.2_202015-12- 23] 25,219 sequences; 60,638,083 total letters Query= NC_031120.1 Length=241147 Score E Sequences producing significant alignments: (Bits) Value seq24649 100 4e-16 >seq24649 Length=1633 Score = 100 bits (110), Expect = 4e-16 Identities = 183/268 (68%), Gaps = 0/268 (0%) Strand=Plus/Minus Query 196779 TGTCTTGTCAGCTGTATCAGCGTAGTGCGGATATGTTCCTCGGTGTACCGTTCAACATCG 196838 |||| || ||||| ||||| || ||||| ||||| || || || || || ||||| |||| Sbjct 1257 TGTCATGCCAGCTATATCAACGCAGTGCAGATATTTTTCTTGGGGTTCCATTCAATATCG 1198 Query 196839 CGTCTTACGCATTGCTGATTCACATGGTGGCGCAACAGGTTAACATGGTACCGGGCGAGT 196898 | || || || || ||| || ||||| || ||||| | | || | || || | Sbjct 1197 CATCCTATGCTTTATTGACACATATGGTTGCACAACAAACTGATCTGCAAGTTGGGGACT 1138 Query 196899 TCGTTTGGACTGGCGGTGACGTCCACATCTACTCCAATCACATGGAACAGGTAGAAGAAC 196958 | |||||||||| || ||| || | ||| ||||||||||||||| || || |||| Sbjct 1137 TTATTTGGACTGGTGGCGACTGTCATTTATACAGCAATCACATGGAACAAGTCGACGAAC 1078 Query 196959 AGCTGTCTCGTAAACCGAAAGCGTTGCCGACGCTGGTTATCAAACGCAAACCGGACAGTA 197018 | | || || | ||| | | || || || || || || || || |||| Sbjct 1077 AATTATCGCGAACACCCCATCCATTACCAACACTAACAATTTTGCGTAAGCCAACAAGTA 1018 Query 197019 TCTTCGATTACAAATTCGAAGACTTCGA 197046 | || ||||| ||||| ||||| ||||| Sbjct 1017 TTTTTGATTATAAATTTGAAGATTTCGA 990 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 771299180902680