Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tetmemena_20sp._20SeJ-2015_20[genbank_20GCA_5F001273295.2_202015-12- 23] 25,219 sequences; 60,638,083 total letters Query= NC_031918.1 Length=45342 Score E Sequences producing significant alignments: (Bits) Value seq24858 102 2e-17 >seq24858 Length=542 Score = 102 bits (112), Expect = 2e-17 Identities = 155/218 (71%), Gaps = 2/218 (1%) Strand=Plus/Plus Query 33659 TCCATTTTCTAGTGCGCAACTGACCTTCAAAATAAACTTGTGAGCCTTTCCTAAGATACT 33718 |||||||||| ||||| || |||||||| ||| | || ||||| | | | | Sbjct 131 TCCATTTTCTGGTGCGTAATCTACCTTCAACATACATATGGCTACCTTTTTTGGCAAATT 190 Query 33719 CACCAGCAATTTCAGCGAGCTTGCCAAAGATAACTACGCGGTGCCATTCAGTTTGCTCCT 33778 |||| ||||| || ||||||||| | | ||| || | ||||||||||||||||| | Sbjct 191 TACCAATTATTTCTGCAAGCTTGCCATAAACAACAACTCTATGCCATTCAGTTTGCTCTT 250 Query 33779 TTTTCTCACCAGTAGCCTTATCATTCCATGATTCCGATGTAGCAACAGAT-ACGTTGGCA 33837 ||||||||||| ||||||| || ||| | ||| | ||| || | || | | | ||| Sbjct 251 TTTTCTCACCACTAGCCTTGTCTCGCCAAGCTTCTGTTGTTGCCA-AGCTAAAGCTGGTT 309 Query 33838 ACAGCGCCGCCATTTGGCATGTATCGCACTTCTGGGTC 33875 || | | | ||||| ||| ||||| ||||| || || Sbjct 310 ACTGGTTCACTATTTGTCATATATCGAACTTCCGGATC 347 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 144929384180112