Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tetrahymena_20borealis_20[genbank_20GCA_5F000260095.1_202012-05-01] 325 sequences; 93,506,076 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq2 105 5e-18 >seq2 Length=2195051 Score = 105 bits (116), Expect = 5e-18 Identities = 207/306 (68%), Gaps = 0/306 (0%) Strand=Plus/Minus Query 66340 CATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAAT 66399 ||| || ||||| || ||||| || || |||| | ||| | |||| || || || | Sbjct 428763 CATGAAAAGATCGGGAATCCAAAGTGCAAAGAATAAATCTCTAGCTCTTTATTCTTCCTT 428704 Query 66400 GCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTA 66459 |||||||| || ||| | ||||| || || | || | |||||| ||||| | ||| Sbjct 428703 ACCGTGATTCTTCTTCAACTAAAGGAAGTCGAAAACATCAGAATGCCAAGGTTCTAAGTA 428644 Query 66460 GATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTT 66519 | ||| || || ||| | | ||||| |||||||| || || || | ||| || || Sbjct 428643 AACGGCAAAGGAACCCTTTCTCTTGCCACCACCTTGATCAACATATCTAGCAGTATCATT 428584 Query 66520 GAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGA 66579 ||||||||| | ||| || || || || ||||| | ||||| || || || Sbjct 428583 GAAGACACGGAGCATAGGAACAAGTCCATTAGAAATACCATTTGTACCTCTAATATAACT 428524 Query 66580 TCCTCGTGCCCGTATATCGTGAACATTCAGACCAATACCACCGGCCGTCTTCGAGATGGC 66639 ||| || | |||| ||||| |||||||||||||| || |||| ||||| Sbjct 428523 ATCTCTAGCTCTGATATTATGAACGGAAAGACCAATACCACCTGCACTCTTAGAGATTAA 428464 Query 66640 AGCACA 66645 |||||| Sbjct 428463 AGCACA 428458 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397566425258000