Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Theileria_20equi_20[genbank_20GCA_5F002189625.1_202017-06-12] 9 sequences; 9,791,141 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq4 246 5e-63 >seq4 Length=637648 Score = 246 bits (272), Expect = 5e-63 Identities = 196/231 (85%), Gaps = 5/231 (2%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||||||||||||||||| | |||||| |||||||||||| ||||||| ||| | Sbjct 186747 GTACAAAGGGCAGGGACGTAGTCTGCACGAGCT-GATGACTCGCGCATACTAGGCATT-C 186804 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 120 |||||| | || || |||| |||| ||| ||||||||||||||| | |||| ||||| Sbjct 186805 CTCGTTCATGATTAAGAATTACAATAATCAATCCCCATCACGATGCATACTCAA-GATTA 186863 Query 121 CCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 180 ||| ||| || ||||||| ||| |||| ||||| |||||||||||||||||||| | Sbjct 186864 CCCAAGCCTCTCAGCCAAGG--ATACACTCAGTGAATGCATCAGTGTAGCGCGCGTGCAG 186921 Query 181 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTG 231 ||||| ||||||||||||||||||||||||||||||||| |||||||| || Sbjct 186922 CCCAGGACATCTAAGGGCATCACAGACCTGTTATTGCCTTAAACTTCCTTG 186972 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751999934435