Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Theileria_20equi_20[genbank_20GCA_5F002189625.1_202017-06-12] 9 sequences; 9,791,141 total letters Query= AAMG01000190.1 Length=117 Score E Sequences producing significant alignments: (Bits) Value seq4 116 2e-24 >seq4 Length=637648 Score = 116 bits (128), Expect = 2e-24 Identities = 99/121 (82%), Gaps = 7/121 (6%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTC----AAAATGATAACATC 56 ||||||||||||||||||||||| ||||||| || ||||| ||| ||| || || Sbjct 187273 GAACCCAAAGACTTTGATTTCTCTCAAGGTGCTGAAGGAGTCGTTCAAACTGACGACCTC 187332 Query 57 GCCCGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCG 116 | ||| ||||||||||| ||||| |||| ||||||||||||||||||||||||||| Sbjct 187333 ---CAATCTCTAGTCGGCATCGTTTATAGTTAGGACTACGACGGTATCTGATCGTCTTCG 187389 Query 117 A 117 | Sbjct 187390 A 187390 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 278399976510