Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Theileria_20equi_20[genbank_20GCA_5F002189625.1_202017-06-12] 9 sequences; 9,791,141 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq4 251 1e-64 >seq4 Length=637648 Score = 251 bits (278), Expect = 1e-64 Identities = 208/247 (84%), Gaps = 5/247 (2%) Strand=Plus/Minus Query 74 TTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGC-TCGAATACATTAGCATGG 132 |||||||||| |||||||||||| | |||||||| ||||| | |||||| ||||||||| Sbjct 187635 TTTACTTTGAGAAAATTAGAGTGCTTCAAGCAGGCTTTTGCCTTGAATACTTTAGCATGG 187576 Query 133 AATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGA-CCGCCGTAATGATT 191 |||||| || |||||| | ||||||||||||||||||| ||||| || |||||| || Sbjct 187575 AATAATGGAGTAGGACTTT-GGTTCTATTTTGTTGGTTT-TAGGAGCCAGAGTAATGGTT 187518 Query 192 AATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATT 251 |||||| | ||| ||||| | ||||| | ||||||||||||||||||| ||||| | Sbjct 187517 AATAGGAACAGTTGGGGGCATTCGTATTTGACTGTCAGAGGTGAAATTCTTAGATTTGTC 187458 Query 252 GAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAG 311 ||||| ||||||||||||||| || |||||||||||||||||||||| ||||||||| Sbjct 187457 AAAGACGAACTACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCA-AGAACGAAAG 187399 Query 312 TTAGGGG 318 ||||||| Sbjct 187398 TTAGGGG 187392 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915199917632