Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Theileria_20equi_20[genbank_20GCA_5F002189625.1_202017-06-12] 9 sequences; 9,791,141 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq9 149 2e-33 >seq9 Length=34474 Score = 149 bits (164), Expect = 2e-33 Identities = 196/266 (74%), Gaps = 8/266 (3%) Strand=Plus/Plus Query 15 ATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGTTAC 74 |||||||||| ||| |||||| ||||| | | ||||||||| |||||||| Sbjct 13553 ATCTTCACAGACATTATTATTTCATTGAGTTTTTTTTTAAGACAGCGCTCAAATCGTTAC 13612 Query 75 GCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATT 134 ||| ||| |||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 13613 GCCTTTCATGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTTGGACCGTTATG 13672 Query 135 GTTACGGCCGCCGTTT-ACCGGGGCTTCGATCAAGAGCTTCGCGTTAGCTAACCCCATCA 193 ||| |||||||||| ||| | |||| | ||| | | ||| | || | Sbjct 13673 AATACAGCCGCCGTTTAACCAGAGCTT--AACAAAA---CACCTTTAACAAATATTTTAT 13727 Query 194 ATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTC-CACTTTCGTGTTTGCAG 252 ||||| ||| || || |||||||||||| | ||||| || | || | | || ||| Sbjct 13728 TTTAACTTTCTGGAACTGGGCAGGCGTCAGTTCTTATACATCATAATTACAT-TTAGCAA 13786 Query 253 AGTGCTGTGTTTTTAATAAACAGTCG 278 |||||||||| ||||||||||| Sbjct 13787 GAACCTGTGTTTTTGATAAACAGTCG 13812 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1260799886528