Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Theileria_20equi_20[genbank_20GCA_5F002189625.1_202017-06-12] 9 sequences; 9,791,141 total letters Query= AAMG01000753.1 Length=364 Score E Sequences producing significant alignments: (Bits) Value seq9 214 4e-53 >seq9 Length=34474 Score = 214 bits (236), Expect = 4e-53 Identities = 258/349 (74%), Gaps = 13/349 (4%) Strand=Plus/Plus Query 9 ATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTTAC 68 |||||||| | |||| |||||| |||| | || || |||||| || ||||||||||| Sbjct 13553 ATCTTCACAGACATTATTATTTCATTGAGTTTTTTTTTAAGACAGCGCTCAAATCGTTAC 13612 Query 69 GCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATA 128 ||||||| ||| |||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 13613 GCCTTTCATGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTTGGACCGTTATG 13672 Query 129 GTTACGGCCGCCGTTT-ACTGGGGCTTAAGTTCACTGCTTCGATTGCTCTAACAGATCCC 187 ||| |||||||||| || | |||||| || ||| | | || | | Sbjct 13673 AATACAGCCGCCGTTTAACCAGAGCTTAACAAAACACCTTTAA-----CAAATATTTTAT 13727 Query 188 CTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTAGCAGA 247 ||||| ||| | || ||||||||||||| || |||||||| | | | |||||| Sbjct 13728 TTTAACTTTCTGGAACTGGGCAGGCGTCAGTTCTTATACATCATAATTACATTTAGCAAG 13787 Query 248 AACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGCCTGTCATAGACAGG 307 |||||||||||||| |||||||||| ||| ||| | | | | | || ||| | Sbjct 13788 AACCTGTGTTTTTGATAAACAGTCGTTTGAGCCAAGTATAT------TACACTATACA-G 13840 Query 308 CACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTTAACAA 356 | | || |||| ||||||| | |||||||||| |||||||||| || Sbjct 13841 TATTCTTTATCCCGAAGTTACAGAATCATTTTGCCTAGTTCCTTAAAAA 13889 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1062399904384