Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Theileria_20equi_20[genbank_20GCA_5F002189625.1_202017-06-12] 9 sequences; 9,791,141 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq4 286 6e-75 >seq4 Length=637648 Score = 286 bits (316), Expect = 6e-75 Identities = 220/259 (85%), Gaps = 3/259 (1%) Strand=Plus/Plus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 |||| ||| | | |||||||||||||||||| |||||| |||||||||||||||||||| Sbjct 186888 ACTCAGTGAATGCATCAGTGTAGCGCGCGTGCAGCCCAGGACATCTAAGGGCATCACAGA 186947 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCA--ATAGTCCCTCTAAGAAGCCAG 119 ||||||||||||| |||||||| | | | | | | | |||||||||||||||| || Sbjct 186948 CCTGTTATTGCCTTAAACTTCCTTGCGATTTATGACCGCAAAGTCCCTCTAAGAAGC-AG 187006 Query 120 CCACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATT 179 ||| | || | |||||||||||||||||||||||||||||| ||||||| Sbjct 187007 TGTAGAACATAACTCCAACACCCTATTTAGCAGGTTAAGGTCTCGTTCGTTAACGGAATT 187066 Query 180 AACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAG 239 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 187067 AACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCAAAGAATCAAG 187126 Query 240 AAAGAGCTATCAATCTGTC 258 ||||||| ||||||||||| Sbjct 187127 AAAGAGCCATCAATCTGTC 187145 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796799930529