Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Theileria_20equi_20[genbank_20GCA_5F002189625.1_202017-06-12] 9 sequences; 9,791,141 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq4 141 1e-31 >seq4 Length=637648 Score = 141 bits (156), Expect = 1e-31 Identities = 140/177 (79%), Gaps = 3/177 (2%) Strand=Plus/Minus Query 13 TTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGC-TCGAATACATTACCATGG 71 |||||||||| |||||||||| | | |||||||| ||||| | |||||| ||| ||||| Sbjct 187635 TTTACTTTGAGAAAATTAGAGTGCTTCAAGCAGGCTTTTGCCTTGAATACTTTAGCATGG 187576 Query 72 AATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGATA 131 |||||| || |||||| | ||||||||||||| ||||| ||||| | |||||| | Sbjct 187575 AATAATGGAGTAGGACTTT-GGTTCTATTTTGTTGGTTT-TAGGAGCCAGAGTAATGGTT 187518 Query 132 AATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTT 188 |||| | | ||| ||||| | ||||| | ||||| ||||||||||||| ||||| Sbjct 187517 AATAGGAACAGTTGGGGGCATTCGTATTTGACTGTCAGAGGTGAAATTCTTAGATTT 187461 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511999955360