Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Theileria_20equi_20[genbank_20GCA_5F002189625.1_202017-06-12] 9 sequences; 9,791,141 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq4 221 2e-55 >seq4 Length=637648 Score = 221 bits (244), Expect = 2e-55 Identities = 243/320 (76%), Gaps = 24/320 (8%) Strand=Plus/Minus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCG----GGTCGCCG--GCT 73 || ||||||||||||||||||||||| | |||| | | || | ||| Sbjct 187054 GAACGAGACCTTAACCTGCTAAATAGGGTG-------TTGGAGTTATGTTCTACACTGCT 187002 Query 74 TCTTAGAGGGACTATCGGCTCA---AGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 ||||||||||||| | | ||| | | | |||||||| ||||||||||||||||||| Sbjct 187001 TCTTAGAGGGACTTTGCGGTCATAAATCGCAAGGAAGTTTAAGGCAATAACAGGTCTGTG 186942 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190 |||||||||||||| |||||| |||||||||||||||||| | || |||| || Sbjct 186941 ATGCCCTTAGATGTCCTGGGCTGCACGCGCGCTACACTGATGCATTCACTGAGTGTAT-- 186884 Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTG--TCGTGCTGGGGATAGAGCAT 248 ||||||| | ||| |||||||||||| | | || ||||| ||||||| || || Sbjct 186883 CCTTGGCTGAGAGGCTTGGGTAATCTTG----AGTATGCATCGTGATGGGGATTGATTAT 186828 Query 249 TGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGA 308 || |||| || || | |||||||||||||||||| ||||| ||||||||| || | || Sbjct 186827 TGTAATTCTTAATCATGAACGAGGAATGCCTAGTATGCGCGAGTCATCAGCTCGTGCAGA 186768 Query 309 TTACGTCCCTGCCCTTTGTA 328 ||||||||||||||||||| Sbjct 186767 CTACGTCCCTGCCCTTTGTA 186748 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947199914752