Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Theileria_20equi_20[genbank_20GCA_5F002189625.1_202017-06-12] 9 sequences; 9,791,141 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq4 499 9e-139 >seq4 Length=637648 Score = 499 bits (552), Expect = 9e-139 Identities = 415/501 (83%), Gaps = 16/501 (3%) Strand=Plus/Plus Query 5 TCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCTCCCC 64 |||||||||||||||||| ||| |||| |||| ||||| ||||||||||||||| Sbjct 187832 TCATTCCAATTACAAGACTTAAA---GCCCCGTATTGTTATTTCTTGTCACTACCTCCCT 187888 Query 65 GTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTC 124 ||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 187889 GTGTCAGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTAGATGTGGTAGCCGTTTCTC 187948 Query 125 AGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAGGCC 184 ||||||||||||||||||||||||||||||||||||||||||| | | || |||||||| Sbjct 187949 AGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTCGTTGCCCCGGTAGGCC 188008 Query 185 ACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCTCAAG 244 | || |||||| || |||| ||||||| |||||| |||||||| ||||||| || || Sbjct 188009 AATACCCTACCGTCCAAAGCTGATAGGTCAGAAACTTGAATGATACATCGCCAGC-AAAA 188067 Query 245 GCCATGCGATTCGTTAAGTTATTATGAATCACC-AAGGAGCCCCGAAGGGCGTTGGTTTT 303 ||||||||||||| ||| ||||||||||||||| | | | | ||| | | |||||| Sbjct 188068 GCCATGCGATTCGCTAATTTATTATGAATCACCGATACACCGCAAAAGCGGGGAGGTTTT 188127 Query 304 TTATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAGAAT 363 ||||||||| || | | || | | ||||||||||| ||| ||| Sbjct 188128 AGGTCTAATAAACGCAAC---TGAAAAACAG------CAAACATGTATTAGCCCTACAAT 188178 Query 364 TACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGAGCC 423 || ||||||||||||||||| || || ||||||||||| ||||||| | ||||||||| Sbjct 188179 TAGCACGGTTATCCATGTAG-AAACTAACATCAAATAAACTATAACTGTTGTAATGAGCC 188237 Query 424 ATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTGAGA 483 |||||||||||||| |||| | |||||||||||||||||||||||||||||||| ||| Sbjct 188238 ATTCGCAGTTTCACCATATA-AAAGCTTATACTTAGACATGCATGGCTTAATCTTTAAGA 188296 Query 484 CAAGCATATGACTACTGGCAG 504 ||||||||||||||||||||| Sbjct 188297 CAAGCATATGACTACTGGCAG 188317 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510399864064