Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Theileria_20parva_20[genbank_20GCA_5F000165365.1_202005-06-30] 9 sequences; 8,347,606 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq4 250 4e-64 seq1 250 4e-64 >seq4 Length=570487 Score = 250 bits (276), Expect = 4e-64 Identities = 197/231 (85%), Gaps = 5/231 (2%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| || | | |||| ||||||| |||| ||||||| ||| | Sbjct 312928 GTACAAAGGGCAGGGACGTAATCTGCACAAGCT-GATGACTTGCGCATACTAGGCATT-C 312985 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 120 |||||| | || |||||||||||| ||| ||||||||||||||| | |||||||| Sbjct 312986 CTCGTTCACGATTAACAATTGCAATAATCGATCCCCATCACGATGCGTACT-AAAGATTA 313044 Query 121 CCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 180 ||||| ||| |||||||||| ||| ||||| |||| |||||||||||||||||||| | Sbjct 313045 CCCGGGCCTCTCGGCCAAGG--ATAAACTCGATGAACGCATCAGTGTAGCGCGCGTGCAG 313102 Query 181 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTG 231 ||||| ||||||||||||||||||||||||||||||||| |||||||| || Sbjct 313103 CCCAGGACATCTAAGGGCATCACAGACCTGTTATTGCCTTAAACTTCCTTG 313153 >seq1 Length=2540030 Score = 250 bits (276), Expect = 4e-64 Identities = 197/231 (85%), Gaps = 5/231 (2%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| || | | |||| ||||||| |||| ||||||| ||| | Sbjct 923139 GTACAAAGGGCAGGGACGTAATCTGCACAAGCT-GATGACTTGCGCATACTAGGCATT-C 923196 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 120 |||||| | || |||||||||||| ||| ||||||||||||||| | |||||||| Sbjct 923197 CTCGTTCACGATTAACAATTGCAATAATCGATCCCCATCACGATGCGTACT-AAAGATTA 923255 Query 121 CCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 180 ||||| ||| |||||||||| ||| ||||| |||| |||||||||||||||||||| | Sbjct 923256 CCCGGGCCTCTCGGCCAAGG--ATAAACTCGATGAACGCATCAGTGTAGCGCGCGTGCAG 923313 Query 181 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTG 231 ||||| ||||||||||||||||||||||||||||||||| |||||||| || Sbjct 923314 CCCAGGACATCTAAGGGCATCACAGACCTGTTATTGCCTTAAACTTCCTTG 923364 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751999934435