Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Theileria_20parva_20[genbank_20GCA_5F000165365.1_202005-06-30] 9 sequences; 8,347,606 total letters Query= AAMG01000190.1 Length=117 Score E Sequences producing significant alignments: (Bits) Value seq4 122 5e-26 seq1 122 5e-26 >seq4 Length=570487 Score = 122 bits (134), Expect = 5e-26 Identities = 100/121 (83%), Gaps = 7/121 (6%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTC----AAAATGATAACATC 56 ||||||||||||||||||||||| ||||||| || ||||| ||| ||| || || Sbjct 313463 GAACCCAAAGACTTTGATTTCTCTCAAGGTGCTGAAGGAGTCGTAAAAACTGACGACCTC 313522 Query 57 GCCCGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCG 116 | ||| ||||||||||| ||||| ||||| ||||||||||||||||||||||||||| Sbjct 313523 ---CAATCTCTAGTCGGCATTGTTTATGGTTAGGACTACGACGGTATCTGATCGTCTTCG 313579 Query 117 A 117 | Sbjct 313580 A 313580 >seq1 Length=2540030 Score = 122 bits (134), Expect = 5e-26 Identities = 100/121 (83%), Gaps = 7/121 (6%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTC----AAAATGATAACATC 56 ||||||||||||||||||||||| ||||||| || ||||| ||| ||| || || Sbjct 923674 GAACCCAAAGACTTTGATTTCTCTCAAGGTGCTGAAGGAGTCGTAAAAACTGACGACCTC 923733 Query 57 GCCCGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCG 116 | ||| ||||||||||| ||||| ||||| ||||||||||||||||||||||||||| Sbjct 923734 ---CAATCTCTAGTCGGCATTGTTTATGGTTAGGACTACGACGGTATCTGATCGTCTTCG 923790 Query 117 A 117 | Sbjct 923791 A 923791 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 278399976510