Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Theileria_20parva_20[genbank_20GCA_5F000165365.1_202005-06-30] 9 sequences; 8,347,606 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq4 266 6e-69 seq1 266 6e-69 >seq4 Length=570487 Score = 266 bits (294), Expect = 6e-69 Identities = 211/247 (85%), Gaps = 5/247 (2%) Strand=Plus/Minus Query 74 TTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGC-TCGAATACATTAGCATGG 132 |||||||||| |||||||||||| ||||||||||| ||||| | ||||| ||||||||| Sbjct 313825 TTTACTTTGAGAAAATTAGAGTGCTCAAAGCAGGCTTTTGCCTTGAATAGTTTAGCATGG 313766 Query 133 AATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGG-ACCGCCGTAATGATT 191 ||||||| | |||||| | ||||||||||||||||||| |||| ||| |||||| || Sbjct 313765 AATAATAAAGTAGGACTTT-GGTTCTATTTTGTTGGTTT-TAGGTACCAAAGTAATGGTT 313708 Query 192 AATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATT 251 |||||| | ||| ||||| | ||||| || ||||||||||||||||||| ||||| || Sbjct 313707 AATAGGAACAGTTGGGGGCATTCGTATTTAACTGTCAGAGGTGAAATTCTTAGATTTGTT 313648 Query 252 GAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAG 311 ||||| ||||||||||||||| || |||||||||||||||||||||| ||||||||| Sbjct 313647 AAAGACGAACTACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCA-AGAACGAAAG 313589 Query 312 TTAGGGG 318 ||||||| Sbjct 313588 TTAGGGG 313582 >seq1 Length=2540030 Score = 266 bits (294), Expect = 6e-69 Identities = 211/247 (85%), Gaps = 5/247 (2%) Strand=Plus/Minus Query 74 TTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGC-TCGAATACATTAGCATGG 132 |||||||||| |||||||||||| ||||||||||| ||||| | ||||| ||||||||| Sbjct 924036 TTTACTTTGAGAAAATTAGAGTGCTCAAAGCAGGCTTTTGCCTTGAATAGTTTAGCATGG 923977 Query 133 AATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGG-ACCGCCGTAATGATT 191 ||||||| | |||||| | ||||||||||||||||||| |||| ||| |||||| || Sbjct 923976 AATAATAAAGTAGGACTTT-GGTTCTATTTTGTTGGTTT-TAGGTACCAAAGTAATGGTT 923919 Query 192 AATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATT 251 |||||| | ||| ||||| | ||||| || ||||||||||||||||||| ||||| || Sbjct 923918 AATAGGAACAGTTGGGGGCATTCGTATTTAACTGTCAGAGGTGAAATTCTTAGATTTGTT 923859 Query 252 GAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAG 311 ||||| ||||||||||||||| || |||||||||||||||||||||| ||||||||| Sbjct 923858 AAAGACGAACTACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCA-AGAACGAAAG 923800 Query 312 TTAGGGG 318 ||||||| Sbjct 923799 TTAGGGG 923793 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915199917632