Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Theileria_20parva_20[genbank_20GCA_5F000165365.1_202005-06-30] 9 sequences; 8,347,606 total letters Query= AAMG01000753.1 Length=364 Score E Sequences producing significant alignments: (Bits) Value seq9 158 3e-36 >seq9 Length=39579 Score = 158 bits (174), Expect = 3e-36 Identities = 244/346 (71%), Gaps = 13/346 (4%) Strand=Plus/Minus Query 9 ATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTTAC 68 |||||||| | |||| | |||| || | | | || |||||| | ||||||||||| Sbjct 3797 ATCTTCACAGACATTATTACTTCATTGAATATTTCTTTAAGACAGCGTTCAAATCGTTAC 3738 Query 69 GCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATA 128 ||||||| |||||| ||||||||||||| ||||| || ||||||||||||||||||| | Sbjct 3737 GCCTTTCATGCGGGCCGGAACTTACCCGGCAAGGGGTTACGCTACCTTAGGACCGTTAAA 3678 Query 129 GTTACGGCCGCCG-TTTACTGGGGCTTAAGTTCACTGCTTCGATTGCTCTAACAGATCCC 187 ||| |||| || |||||| | ||||| | | | | ||| | | Sbjct 3677 AATACAGCCGTCGTTTTACTAGAGCTTATAAAAATATATCACAAT----TAATATTTTTT 3622 Query 188 CTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTAGCAGA 247 ||||| | | || || || ||||| |||||| | |||||| | | | |||||| | Sbjct 3621 GTTAACTTACTAGAACTGGACAGGCATCAGCTTTTGTACATCATTATTAAATTTAGCAAA 3562 Query 248 AACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGCCTGTCATAGACAGG 307 | |||||||||||| |||||||||| ||| |||| | | | | |||| | Sbjct 3561 AGCCTGTGTTTTTGATAAACAGTCGTTTGAACCTAGTATTT---TACACTCAT-----TG 3510 Query 308 CACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTTAA 353 | |||| |||| ||||||||| |||||||||| |||||||||| Sbjct 3509 TATTCCTTATCCCGAAGTTACGGAATCATTTTGCCTAGTTCCTTAA 3464 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1062399904384