Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Theileria_20parva_20[genbank_20GCA_5F000165365.1_202005-06-30] 9 sequences; 8,347,606 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq4 277 3e-72 seq1 277 3e-72 >seq4 Length=570487 Score = 277 bits (306), Expect = 3e-72 Identities = 214/253 (85%), Gaps = 10/253 (4%) Strand=Plus/Plus Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 75 |||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||| Sbjct 313083 TCAGTGTAGCGCGCGTGCAGCCCAGGACATCTAAGGGCATCACAGACCTGTTATTGCCTT 313142 Query 76 AAACTTCCATTGGCTGGA--AGCCAATAGTCCCTCTAAGAAGCCA------GCCACCAAC 127 |||||||| | | | | | | | |||||||||||||||| | | || | | Sbjct 313143 AAACTTCCTTGCGATTTATAACCGCAAAGTCCCTCTAAGAAGCGATGACGGGACAGCGAG 313202 Query 128 --CATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAG 185 | || || |||||||||||||||||||||||||||||| ||||||||||||| Sbjct 313203 AGCTTATTCCCGTACCCTATTTAGCAGGTTAAGGTCTCGTTCGTTAACGGAATTAACCAG 313262 Query 186 ACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAG 245 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 313263 ACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCAAAGAATCAAGAAAGAG 313322 Query 246 CTATCAATCTGTC 258 ||||||||||||| Sbjct 313323 CTATCAATCTGTC 313335 >seq1 Length=2540030 Score = 277 bits (306), Expect = 3e-72 Identities = 214/253 (85%), Gaps = 10/253 (4%) Strand=Plus/Plus Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 75 |||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||| Sbjct 923294 TCAGTGTAGCGCGCGTGCAGCCCAGGACATCTAAGGGCATCACAGACCTGTTATTGCCTT 923353 Query 76 AAACTTCCATTGGCTGGA--AGCCAATAGTCCCTCTAAGAAGCCA------GCCACCAAC 127 |||||||| | | | | | | | |||||||||||||||| | | || | | Sbjct 923354 AAACTTCCTTGCGATTTATAACCGCAAAGTCCCTCTAAGAAGCGATGACGGGACAGCGAG 923413 Query 128 --CATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAG 185 | || || |||||||||||||||||||||||||||||| ||||||||||||| Sbjct 923414 AGCTTATTCCCGTACCCTATTTAGCAGGTTAAGGTCTCGTTCGTTAACGGAATTAACCAG 923473 Query 186 ACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAG 245 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 923474 ACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCAAAGAATCAAGAAAGAG 923533 Query 246 CTATCAATCTGTC 258 ||||||||||||| Sbjct 923534 CTATCAATCTGTC 923546 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796799930529