Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Theileria_20parva_20[genbank_20GCA_5F000165365.1_202005-06-30] 9 sequences; 8,347,606 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq4 345 7e-93 seq1 345 7e-93 >seq4 Length=570487 Score = 345 bits (382), Expect = 7e-93 Identities = 241/270 (89%), Gaps = 3/270 (1%) Strand=Plus/Plus Query 25 CGACGGT-CATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACG 83 || |||| ||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 308704 CGTCGGTGCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACG 308763 Query 84 TTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAA 143 ||||||||||| ||||||||||||| || ||| || |||||| || |||||||||| Sbjct 308764 TTCCCTATTAGCGGGTGAACAATCCGACACTTTGAGACTTCTGCATCTCAATGATAGGAA 308823 Query 144 GAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCA 203 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 308824 GAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCA 308883 Query 204 GTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACT-AAAGGA 262 |||||||||||||||||||||||| |||||||||| | || | | |||| |||||| Sbjct 308884 GTTATCCCTGTGGTAACTTTTCTGACACCTCTAGCTGTATATCT-TACAGACTCAAAGGA 308942 Query 263 TCGATAGGCCACACTTTCATGGTTTGTATT 292 ||||||||||| |||||| ||||||||| Sbjct 308943 TCGATAGGCCATGCTTTCACAGTTTGTATT 308972 >seq1 Length=2540030 Score = 345 bits (382), Expect = 7e-93 Identities = 241/270 (89%), Gaps = 3/270 (1%) Strand=Plus/Plus Query 25 CGACGGT-CATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACG 83 || |||| ||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 918915 CGTCGGTGCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACG 918974 Query 84 TTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAA 143 ||||||||||| ||||||||||||| || ||| || |||||| || |||||||||| Sbjct 918975 TTCCCTATTAGCGGGTGAACAATCCGACACTTTGAGACTTCTGCATCTCAATGATAGGAA 919034 Query 144 GAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCA 203 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 919035 GAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCA 919094 Query 204 GTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACT-AAAGGA 262 |||||||||||||||||||||||| |||||||||| | || | | |||| |||||| Sbjct 919095 GTTATCCCTGTGGTAACTTTTCTGACACCTCTAGCTGTATATCT-TACAGACTCAAAGGA 919153 Query 263 TCGATAGGCCACACTTTCATGGTTTGTATT 292 ||||||||||| |||||| ||||||||| Sbjct 919154 TCGATAGGCCATGCTTTCACAGTTTGTATT 919183 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854399923104