Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Theileria_20parva_20[genbank_20GCA_5F000165365.1_202005-06-30] 9 sequences; 8,347,606 total letters Query= AAMG01001213.1 Length=600 Score E Sequences producing significant alignments: (Bits) Value seq4 77.0 1e-11 seq1 77.0 1e-11 >seq4 Length=570487 Score = 77.0 bits (84), Expect = 1e-11 Identities = 76/96 (79%), Gaps = 3/96 (3%) Strand=Plus/Plus Query 471 GTTTCAGGTACTATTT-CACTCCCCGCCAGGGGTACTTTTCACCTTTCCCTCACGGTACT 529 |||||||||||| || ||||| | | | | ||||||||||||||||||||||||| Sbjct 311307 GTTTCAGGTACTTTTAACACTCTTTTCAAAG--TTCTTTTCACCTTTCCCTCACGGTACT 311364 Query 530 TGTCCGCTATCGGTCACCAAGGAGTATTTAGGCTTA 565 ||| ||||||||||| | | |||||||| |||| Sbjct 311365 TGTTCGCTATCGGTCTCACACCCGTATTTAGCCTTA 311400 >seq1 Length=2540030 Score = 77.0 bits (84), Expect = 1e-11 Identities = 76/96 (79%), Gaps = 3/96 (3%) Strand=Plus/Plus Query 471 GTTTCAGGTACTATTT-CACTCCCCGCCAGGGGTACTTTTCACCTTTCCCTCACGGTACT 529 |||||||||||| || ||||| | | | | ||||||||||||||||||||||||| Sbjct 921518 GTTTCAGGTACTTTTAACACTCTTTTCAAAG--TTCTTTTCACCTTTCCCTCACGGTACT 921575 Query 530 TGTCCGCTATCGGTCACCAAGGAGTATTTAGGCTTA 565 ||| ||||||||||| | | |||||||| |||| Sbjct 921576 TGTTCGCTATCGGTCTCACACCCGTATTTAGCCTTA 921611 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1817599836416