Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Theileria_20parva_20[genbank_20GCA_5F000165365.1_202005-06-30] 9 sequences; 8,347,606 total letters Query= AAMG01001291.1 Length=420 Score E Sequences producing significant alignments: (Bits) Value seq4 73.4 1e-10 seq1 73.4 1e-10 >seq4 Length=570487 Score = 73.4 bits (80), Expect = 1e-10 Identities = 54/63 (86%), Gaps = 0/63 (0%) Strand=Plus/Plus Query 305 GTTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGC 364 ||||||||| |||||||||||||||||| |||| ||||||||| || ||||||||| Sbjct 311337 GTTCTTTTCACCTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCACACCCGTATTTAGC 311396 Query 365 CTT 367 ||| Sbjct 311397 CTT 311399 >seq1 Length=2540030 Score = 73.4 bits (80), Expect = 1e-10 Identities = 54/63 (86%), Gaps = 0/63 (0%) Strand=Plus/Plus Query 305 GTTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGC 364 ||||||||| |||||||||||||||||| |||| ||||||||| || ||||||||| Sbjct 921548 GTTCTTTTCACCTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCACACCCGTATTTAGC 921607 Query 365 CTT 367 ||| Sbjct 921608 CTT 921610 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1241599888256