Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Theileria_20parva_20[genbank_20GCA_5F000165365.1_202005-06-30] 9 sequences; 8,347,606 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq4 104 3e-20 seq1 104 3e-20 >seq4 Length=570487 Score = 104 bits (114), Expect = 3e-20 Identities = 84/99 (85%), Gaps = 2/99 (2%) Strand=Plus/Plus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG-GGC 68 ||||||||||||||| || | |||||| | |||||||||||||||| ||||| ||| Sbjct 313728 AAACCAACAAAATAGA-ACCAAAGTCCTACTTTATTATTCCATGCTAAACTATTCAAGGC 313786 Query 69 GTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAA 107 ||||||||||||| ||||||||||||||||| ||||| Sbjct 313787 AAAAGCCTGCTTTGAGCACTCTAATTTTCTCAAAGTAAA 313825 >seq1 Length=2540030 Score = 104 bits (114), Expect = 3e-20 Identities = 84/99 (85%), Gaps = 2/99 (2%) Strand=Plus/Plus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG-GGC 68 ||||||||||||||| || | |||||| | |||||||||||||||| ||||| ||| Sbjct 923939 AAACCAACAAAATAGA-ACCAAAGTCCTACTTTATTATTCCATGCTAAACTATTCAAGGC 923997 Query 69 GTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAA 107 ||||||||||||| ||||||||||||||||| ||||| Sbjct 923998 AAAAGCCTGCTTTGAGCACTCTAATTTTCTCAAAGTAAA 924036 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595199948106