Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Theileria_20parva_20[genbank_20GCA_5F000165365.1_202005-06-30] 9 sequences; 8,347,606 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq4 147 2e-33 seq1 147 2e-33 >seq4 Length=570487 Score = 147 bits (162), Expect = 2e-33 Identities = 143/180 (79%), Gaps = 3/180 (2%) Strand=Plus/Minus Query 13 TTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGC-TCGAATACATTACCATGG 71 |||||||||| |||||||||| | ||||||||||| ||||| | ||||| ||| ||||| Sbjct 313825 TTTACTTTGAGAAAATTAGAGTGCTCAAAGCAGGCTTTTGCCTTGAATAGTTTAGCATGG 313766 Query 72 AATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGATA 131 ||||||| | |||||| | ||||||||||||| ||||| |||| | |||||| | Sbjct 313765 AATAATAAAGTAGGACTTT-GGTTCTATTTTGTTGGTTT-TAGGTACCAAAGTAATGGTT 313708 Query 132 AATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTATT 191 |||| | | ||| ||||| | ||||| || ||||| ||||||||||||| ||||| || Sbjct 313707 AATAGGAACAGTTGGGGGCATTCGTATTTAACTGTCAGAGGTGAAATTCTTAGATTTGTT 313648 >seq1 Length=2540030 Score = 147 bits (162), Expect = 2e-33 Identities = 143/180 (79%), Gaps = 3/180 (2%) Strand=Plus/Minus Query 13 TTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGC-TCGAATACATTACCATGG 71 |||||||||| |||||||||| | ||||||||||| ||||| | ||||| ||| ||||| Sbjct 924036 TTTACTTTGAGAAAATTAGAGTGCTCAAAGCAGGCTTTTGCCTTGAATAGTTTAGCATGG 923977 Query 72 AATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGATA 131 ||||||| | |||||| | ||||||||||||| ||||| |||| | |||||| | Sbjct 923976 AATAATAAAGTAGGACTTT-GGTTCTATTTTGTTGGTTT-TAGGTACCAAAGTAATGGTT 923919 Query 132 AATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTATT 191 |||| | | ||| ||||| | ||||| || ||||| ||||||||||||| ||||| || Sbjct 923918 AATAGGAACAGTTGGGGGCATTCGTATTTAACTGTCAGAGGTGAAATTCTTAGATTTGTT 923859 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511999955360