Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Theileria_20parva_20[genbank_20GCA_5F000165365.1_202005-06-30] 9 sequences; 8,347,606 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq4 230 4e-58 seq1 230 4e-58 >seq4 Length=570487 Score = 230 bits (254), Expect = 4e-58 Identities = 247/321 (77%), Gaps = 17/321 (5%) Strand=Plus/Minus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCC---------AGGCCCGCTTTGGCGGGTCGCCG 70 || ||||||||||||||||||||||| | || | | || | ||| || Sbjct 313244 GAACGAGACCTTAACCTGCTAAATAGGGTACGGGAATAAGCTCTCGCTGTCCCGTCATCG 313185 Query 71 GCTTCTTAGAGGGACTAT-CGGCTC--AAGCCGATGGAAGTTTGAGGCAATAACAGGTCT 127 ||||||||||||||| | ||| | || | | |||||||| |||||||||||||||| Sbjct 313184 -CTTCTTAGAGGGACTTTGCGGTTATAAATCGCAAGGAAGTTTAAGGCAATAACAGGTCT 313126 Query 128 GTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCA 187 ||||||||||||||||| |||||| |||||||||||||||||| || |||||| | Sbjct 313125 GTGATGCCCTTAGATGTCCTGGGCTGCACGCGCGCTACACTGATGCGTTCATCGAGTTTA 313066 Query 188 TCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCA 247 | ||||||||| ||| | |||||||||| | || | ||||| ||||||| || | Sbjct 313065 T--CCTTGGCCGAGAGGCCCGGGTAATCTT-TAGTACGC-ATCGTGATGGGGATCGATTA 313010 Query 248 TTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTG 307 |||||||| || || | |||||||||||||||||| |||| ||||||||| | | | Sbjct 313009 TTGCAATTGTTAATCGTGAACGAGGAATGCCTAGTATGCGCAAGTCATCAGCTTGTGCAG 312950 Query 308 ATTACGTCCCTGCCCTTTGTA 328 ||||||||||||||||||||| Sbjct 312949 ATTACGTCCCTGCCCTTTGTA 312929 >seq1 Length=2540030 Score = 230 bits (254), Expect = 4e-58 Identities = 247/321 (77%), Gaps = 17/321 (5%) Strand=Plus/Minus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCC---------AGGCCCGCTTTGGCGGGTCGCCG 70 || ||||||||||||||||||||||| | || | | || | ||| || Sbjct 923455 GAACGAGACCTTAACCTGCTAAATAGGGTACGGGAATAAGCTCTCGCTGTCCCGTCATCG 923396 Query 71 GCTTCTTAGAGGGACTAT-CGGCTC--AAGCCGATGGAAGTTTGAGGCAATAACAGGTCT 127 ||||||||||||||| | ||| | || | | |||||||| |||||||||||||||| Sbjct 923395 -CTTCTTAGAGGGACTTTGCGGTTATAAATCGCAAGGAAGTTTAAGGCAATAACAGGTCT 923337 Query 128 GTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCA 187 ||||||||||||||||| |||||| |||||||||||||||||| || |||||| | Sbjct 923336 GTGATGCCCTTAGATGTCCTGGGCTGCACGCGCGCTACACTGATGCGTTCATCGAGTTTA 923277 Query 188 TCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCA 247 | ||||||||| ||| | |||||||||| | || | ||||| ||||||| || | Sbjct 923276 T--CCTTGGCCGAGAGGCCCGGGTAATCTT-TAGTACGC-ATCGTGATGGGGATCGATTA 923221 Query 248 TTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTG 307 |||||||| || || | |||||||||||||||||| |||| ||||||||| | | | Sbjct 923220 TTGCAATTGTTAATCGTGAACGAGGAATGCCTAGTATGCGCAAGTCATCAGCTTGTGCAG 923161 Query 308 ATTACGTCCCTGCCCTTTGTA 328 ||||||||||||||||||||| Sbjct 923160 ATTACGTCCCTGCCCTTTGTA 923140 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947199914752