Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Theileria_20parva_20[genbank_20GCA_5F000165365.1_202005-06-30] 9 sequences; 8,347,606 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq4 111 3e-22 seq1 111 3e-22 >seq4 Length=570487 Score = 111 bits (122), Expect = 3e-22 Identities = 97/118 (82%), Gaps = 2/118 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||| | | ||| || || |||||| ||||||| ||| || ||| Sbjct 308682 GTACGAGAGGAACAGTTGG-TTCGGA-TACTTGGTTAATGCGGCTAGTTGAAAAGCTAGT 308625 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGC 118 ||||||||||||||||| | ||||| ||| |||||||||||||||||||||||||||| Sbjct 308624 GCCGCGAAGCTACCATCCGTTGGATAATGACTGAACGCCTCTAAGTCAGAATCCATGC 308567 >seq1 Length=2540030 Score = 111 bits (122), Expect = 3e-22 Identities = 97/118 (82%), Gaps = 2/118 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||| | | ||| || || |||||| ||||||| ||| || ||| Sbjct 918893 GTACGAGAGGAACAGTTGG-TTCGGA-TACTTGGTTAATGCGGCTAGTTGAAAAGCTAGT 918836 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGC 118 ||||||||||||||||| | ||||| ||| |||||||||||||||||||||||||||| Sbjct 918835 GCCGCGAAGCTACCATCCGTTGGATAATGACTGAACGCCTCTAAGTCAGAATCCATGC 918778 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819199928576