Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Toxoplasma_20gondii_20[genbank_20GCA_5F000256705.1_202012-03-27] 5,717 sequences; 63,046,945 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq4568 154 2e-35 seq3082 111 2e-22 >seq4568 Length=403 Score = 154 bits (170), Expect = 2e-35 Identities = 121/141 (86%), Gaps = 3/141 (2%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| || ||| |||| | ||||| |||||||||||| ||| | Sbjct 242 GTACAAAGGGCAGGGACGTAATCGGCGCAAGCT-GCTGACTTGCGCTTACTAGGGATT-C 299 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119 ||||||||||| ||| |||||||||| |||||||||| ||||| | | ||| | |||||| Sbjct 300 CTCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCAGCACGACGGAGTTTAACAAGATT 359 Query 120 ACCCGGACCTGTCGGCCAAGG 140 |||||| ||| |||||||||| Sbjct 360 ACCCGGGCCTTTCGGCCAAGG 380 >seq3082 Length=2178 Score = 111 bits (122), Expect = 2e-22 Identities = 165/229 (72%), Gaps = 9/229 (4%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||| | ||||| | || | |||||| |||||||||||||| ||| Sbjct 1175 GTACAAAGGGCAGGGACGAAATCAACTCAAG-ATAATGACTTGCGCTTACTAGGAA-TTC 1232 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATT- 119 |||||| | ||| |||||| ||| | ||||||| | | | || |||||| Sbjct 1233 CTCGTTTATGACGGACAATTACAACCGACAATCCCCA-CCTTAACACGCTTTGAAGATTC 1291 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 || | | ||| ||| |||||||| | | | |||||| | ||||| Sbjct 1292 ACAACATCGTTTCGATATTGGT-----ACTCGTTGTGCATGTTATTGTAGCACACGTGCA 1346 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228 |||||| ||||||||||||||||||||||||||||||| | ||||| Sbjct 1347 GCCCAGGTTATCTAAGGGCATCACAGACCTGTTATTGCCTTGATCTTCC 1395 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751958351655