Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Toxoplasma_20gondii_20[genbank_20GCA_5F000256705.1_202012-03-27] 5,717 sequences; 63,046,945 total letters Query= AAMG01000811.1 Length=502 Score E Sequences producing significant alignments: (Bits) Value seq5716 163 9e-38 seq221 82.4 2e-13 seq264 77.0 1e-11 >seq5716 Length=452 Score = 163 bits (180), Expect = 9e-38 Identities = 176/230 (77%), Gaps = 10/230 (4%) Strand=Plus/Minus Query 1 TACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCAT 60 |||| ||||||| |||||||||||||||||||||||| | || |||||||||||||||| Sbjct 289 TACGCTCGCAAGGGTGAAACTCAAAGGAATTGACGGGGGCTCGTACAAGCGGTGGAGCAT 230 Query 61 GTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACATCCTCTGACCCCTC 120 || |||||||||| | ||||||| |||||||||| | || ||| | | | Sbjct 229 GTAATTTAATTCGATGTAACGCGATAAACCTTACCAGAACTAGACTAAATTT----ATTT 174 Query 121 TAGA-GATAGAGGTTTCCCCTTCGGGGGACAGAGTGACAGGTGATGCATGGTTGTCGTCA 179 || | || | || || | | | | ||||| | ||||||| |||||||| Sbjct 173 TAAATTATTAATATT---AATT--AATAAAAAATTTACAGGAGGTGCATGGCTGTCGTCA 119 Query 180 GCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTA 229 ||||||||||||||||||||||||||||||||| |||||||| ||||||| Sbjct 118 GCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCTACGAGCGCTACCCTTA 69 >seq221 Length=153210 Score = 82.4 bits (90), Expect = 2e-13 Identities = 68/83 (82%), Gaps = 0/83 (0%) Strand=Plus/Minus Query 1 TACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCAT 60 |||| | ||||| |||||||||||||||||||||| | | | | |||||||||||||| Sbjct 77284 TACGCTCCCAAGGGTGAAACTCAAAGGAATTGACGGTGGCTTGTAAAAGCGGTGGAGCAT 77225 Query 61 GTGGTTTAATTCGAAGCAACGCG 83 || |||||||||| | | |||| Sbjct 77224 GTAATTTAATTCGATGAATCGCG 77202 >seq264 Length=11980 Score = 77.0 bits (84), Expect = 1e-11 Identities = 60/72 (83%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 150 AGAGTGACAGGTGATGCATGGTTGTCGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCC 209 ||| | ||||| | | ||| |||||||||||||||||| || ||||||||| |||||| Sbjct 1540 AGAATCACAGGAAAAGTGTGGATGTCGTCAGCTCGTGTCGCGACATGTTGGGTCAAGTCC 1481 Query 210 CGCAACGAGCGC 221 ||| |||||||| Sbjct 1480 CGCCACGAGCGC 1469 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1503914016320