Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Toxoplasma_20gondii_20[genbank_20GCA_5F000256705.1_202012-03-27] 5,717 sequences; 63,046,945 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq4321 120 5e-25 seq3084 96.9 6e-18 seq5715 73.4 7e-11 >seq4321 Length=473 Score = 120 bits (132), Expect = 5e-25 Identities = 86/99 (87%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 182 AACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTC 241 |||||||||||||||||||||||||||||||||||||||||||| | ||||||||||| Sbjct 1 AACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCCGTCACCTCTAGCCAG 60 Query 242 AAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTC 280 || || ||| |||||||||||||||||| ||||| Sbjct 61 AATCTTTCTGGGCTTAAAGGATCGATAGGCCATGCTTTC 99 >seq3084 Length=748 Score = 96.9 bits (106), Expect = 6e-18 Identities = 58/61 (95%), Gaps = 0/61 (0%) Strand=Plus/Plus Query 33 ATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATT 92 || |||||| |||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 683 ATAAGTAGGATAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTATT 742 Query 93 A 93 | Sbjct 743 A 743 >seq5715 Length=664 Score = 73.4 bits (80), Expect = 7e-11 Identities = 122/175 (70%), Gaps = 6/175 (3%) Strand=Plus/Minus Query 53 CTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACG 112 |||||||| |||| ||| |||||||||||||| || ||| |||| ||||| ||||| Sbjct 515 CTGTCTCACGACGTTCTGAACCCAGCTCACGTGCCGCTTTAATGGGCGAACAGACCAACC 456 Query 113 CTTACCGAATTCTGCTTCGG---TATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGC 169 ||| || ||||| | | | ||| || ||||||||||||| | |||| | Sbjct 455 CTT---GAGACCTGCTACAGCCTCAGGATGCGACGAGCCGACATCGAGGTGCCAAACCTC 399 Query 170 AACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTT 224 |||| |||| || | || | | |||| ||||||||| ||||||||| Sbjct 398 CCCGTCAATATGGACTATCGGGAGAGATCAGCCTGTTATCCCTAGAGTAACTTTT 344 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854351153952