Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Toxoplasma_20gondii_20[genbank_20GCA_5F000256705.1_202012-03-27] 5,717 sequences; 63,046,945 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq4568 210 4e-52 seq3082 120 6e-25 >seq4568 Length=403 Score = 210 bits (232), Expect = 4e-52 Identities = 145/163 (89%), Gaps = 2/163 (1%) Strand=Plus/Minus Query 166 ACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACT 225 |||||| |||||| ||||| | || |||||||| |||| | |||||||||||||||||| Sbjct 403 ACTGACGGAGCCAGCGAGTACTTC--CTTGGCCGAAAGGCCCGGGTAATCTTGTTAAACT 346 Query 226 CTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAG 285 | |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 345 CCGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATCCCTAGTAAG 286 Query 286 CGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 ||| |||| |||| ||| |||||||||||||||||||||| Sbjct 285 CGCAAGTCAGCAGCTTGCGCCGATTACGTCCCTGCCCTTTGTA 243 >seq3082 Length=2178 Score = 120 bits (132), Expect = 6e-25 Identities = 164/227 (72%), Gaps = 8/227 (4%) Strand=Plus/Minus Query 103 GGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGC 162 ||||| | ||||||||||||||||||||||||||||||| |||||| ||||| | || Sbjct 1395 GGAAGATCAAGGCAATAACAGGTCTGTGATGCCCTTAGATAACCTGGGCTGCACGTGTGC 1336 Query 163 TACACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAA-GGTCTGGGTAATCTTGTTA 221 |||| | ||| |||||||| ||| || || | | | | ||||| | | Sbjct 1335 TACAATAACATGCACAACGAGT-----ACCAATATCGAAACGATGTTGTGAATCT--TCA 1283 Query 222 AACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAG 281 || ||| | ||||||| | ||| |||| | || | |||||||||| ||||| Sbjct 1282 AAGCGTGTTAAGGTGGGGATTGTCGGTTGTAATTGTCCGTCATAAACGAGGAATTCCTAG 1223 Query 282 TAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 ||||||| ||||| | | | ||||||| ||||||||||||||||| Sbjct 1222 TAAGCGCAAGTCATTATCTTGAGTTGATTTCGTCCCTGCCCTTTGTA 1176 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947145848576