Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Toxoplasma_20gondii_20[genbank_20GCA_5F000256705.1_202012-03-27] 5,717 sequences; 63,046,945 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq4321 190 7e-46 seq3665 82.4 2e-13 >seq4321 Length=473 Score = 190 bits (210), Expect = 7e-46 Identities = 248/343 (72%), Gaps = 19/343 (6%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||| | |||||| ||||||||||||||| ||||| ||||||| || ||||||| Sbjct 146 CTTTCGGTCTACAAGAGATTTCTGTTCTCTTTGAGTTAACCTTAGGGCATCTGCGTTGAT 205 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 ||||| ||||||||||||||||||||||||||||| ||| |||||| ||| Sbjct 206 GTTTAGCAGATGTGCCGCCCCAGCCAAACTCCCCATTTGATAATGTCCTCA--------- 256 Query 127 GGCCCGCGAAGGACCTTAACGCCAGAAAATGG--TCGGTGAAGACCAGTTCCGCTTCATT 184 | ||| | | || || | | | | | || ||| ||| ||| || ||| Sbjct 257 -----GTGAATGTCGTTTACACTTTAGTTTCGCGTTTCTGCAGAGCAGATCCACTA-ATT 310 Query 185 --GATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCA 242 || | || ||| || || | ||||||||||||| ||| | ||||||| Sbjct 311 CCGAGTGAGCAAAGCCACATTAGAAGCCGTGGTATTTCACTGTCGCATTAGATGCTCCCA 370 Query 243 CTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGT 302 | ||| ||||| || ||||| ||| |||| || ||||||||||||||||||||||| Sbjct 371 CGTATGCTACATCTTCCAAGTAGTTTTACAATATCAAACTAGAGTCAAGCTCAACAGGGT 430 Query 303 CTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGT 345 |||||||||||||| || ||||||||||||||||||||||| Sbjct 431 CTTCTTTCCCCGCTTATATTGCCAAGCCCGTTCCCTTGGCTGT 473 >seq3665 Length=853 Score = 82.4 bits (90), Expect = 2e-13 Identities = 59/68 (87%), Gaps = 0/68 (0%) Strand=Plus/Minus Query 461 GTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCA 520 |||||||||||||| |||| || |||| | |||||||||||||||||||||||||| Sbjct 853 GTTTACCCGCGCTTATGCGAATCTCATCACAATAACATTCAGAGCACTGGGCAGAAATCA 794 Query 521 CATTGCGT 528 |||||||| Sbjct 793 CATTGCGT 786 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635106515616