Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Toxoplasma_20gondii_20[genbank_20GCA_5F000256705.1_202012-03-27] 5,717 sequences; 63,046,945 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq3083 251 2e-64 seq735 219 1e-54 seq2144 199 1e-48 seq722 84.2 7e-14 >seq3083 Length=1092 Score = 251 bits (278), Expect = 2e-64 Identities = 345/469 (74%), Gaps = 35/469 (7%) Strand=Plus/Plus Query 40 CAGTATTTATTGTCACTACCTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCT 99 || ||||| | |||||||||||||||||||||| || ||||||||||||||||||||| Sbjct 111 CACTATTTTTGTTCACTACCTCCCCGTGTCGGGACTGAGTAATTTGCGCGCCTGCTGCCA 170 Query 100 TCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCG 159 |||| |||||||||||||| ||||||||||||||||||||||| ||||||||||||||| Sbjct 171 CCCTTAGATGTGGTAGCCGTCTCTCAGGCTCCCTCTCCGGAATCAAACCCTAATTCCCCG 230 Query 160 TTACCCGTTGATA-CCATGGTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAA 218 | ||| | | ||| || ||||| |||| || | ||||| | ||| ||||||| || ||| Sbjct 231 TCACCTG-TAATAGCCTTGGTAAGCCAATACCTTACCAAC-CAAGCTGATAGGTCACAAA 288 Query 219 TTTGAATGAACCATCGCCGGCTCAAGGCCATGCGAT-TCGTTAAGTTATTATGAATCACC 277 | ||||| | || ||| || ||||| || | ||| | | |||||| Sbjct 289 CTGAAATGAGTCCTC----GCTAAA------GCGATATC--TGAGTCTATCCG-ATCACC 335 Query 278 AAGGAGCCCCGAAGGGCGTTGGTTTTTTATCTAATAA--ATACACCCCTTCCGAAGTCGG 335 | |||| |||||| || | ||||| |||| | | ||| | | ||| | | Sbjct 336 TA-GAGCACCGAAGTGCTACCGAGTTTTA-CTAAAGACCAATCACGCAT---GAAATGCG 390 Query 336 GGTTTTTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATC 395 |||||||||||| ||| || ||| || ||||||| | || | | || Sbjct 391 --------ACATGTATTAGCTTCAGATTTTCCATGGATATCCATTGAAGAA--TTGTCTC 440 Query 396 AAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATAC 455 | | |||| || |||||||||| |||||||||||| || | || ||||||| Sbjct 441 ATTGTTATAATAAGTGTTTTAATGAGCTATTCGCAGTTTCGTCGTGT-GAAAACTTATAC 499 Query 456 TTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 |||||| ||||||||||||||||| | |||||||||||||||||||||| Sbjct 500 TTAGACTTGCATGGCTTAATCTTTCAAACAAGCATATGACTACTGGCAG 548 >seq735 Length=203059 Score = 219 bits (242), Expect = 1e-54 Identities = 186/224 (83%), Gaps = 9/224 (4%) Strand=Plus/Plus Query 285 CCCGAAGG-GCGTTGGTTTTTTATCTAATAAATACACCCCTTCC----GAAGTCGGGGTT 339 || ||||| | ||||||| | ||||||||||| || ||||||| |||| || | Sbjct 92415 CCGGAAGGTGGGTTGGTTCTGTATCTAATAAACACTGCCCTTCCAAGGGAAGA--GGCAT 92472 Query 340 TTTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAAT 399 | |||||||||||| ||||||||||||||||||||||||||||| | || | | ||| Sbjct 92473 GTGCGCATGTATTAGCCATAGAATTACCACGGTTATCCATGTAGTAAAG-ACCACCGAAT 92531 Query 400 AAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAG 459 |||| ||||||| ||||||||| |||||||||| | | ||||| | |||||||||||| Sbjct 92532 AAACTATAACTGTTTTAATGAGTCATTCGCAGTCTAGCCGTATAAAA-GCTTATACTTAG 92590 Query 460 ACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCA 503 |||||||||||||||||||| ||||||||||||||||||||||| Sbjct 92591 ACATGCATGGCTTAATCTTTAAGACAAGCATATGACTACTGGCA 92634 >seq2144 Length=1389 Score = 199 bits (220), Expect = 1e-48 Identities = 141/158 (89%), Gaps = 4/158 (3%) Strand=Plus/Plus Query 344 GCATGTAT--TAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAA 401 |||||||| |||| |||||||||||| |||||||||||||||| | || ||||||||| Sbjct 1234 GCATGTATATTAGCCATAGAATTACCACAGTTATCCATGTAGTAAAG-ACCATCAAATAA 1292 Query 402 ACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGAC 461 || ||||||| |||||||||||||||||||||| | ||||| | |||||||||||||| Sbjct 1293 ACTATAACTGTTTTAATGAGCCATTCGCAGTTTAGCCGTATAAAA-GCTTATACTTAGAC 1351 Query 462 ATGCATGGCTTAATCTTTGAGACAAGCATATGACTACT 499 |||||||||||||||||| ||||||||||||||||||| Sbjct 1352 ATGCATGGCTTAATCTTTAAGACAAGCATATGACTACT 1389 >seq722 Length=18259 Score = 84.2 bits (92), Expect = 7e-14 Identities = 88/113 (78%), Gaps = 2/113 (2%) Strand=Plus/Plus Query 382 AGTAAGGTACTATCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTA 441 ||||| | || |||| ||||| |||| || | || | ||||||||||||||| | ||| Sbjct 6762 AGTAAAG-ACGATCACATAAAATATAAGTGTTGTAGTAAGCCATTCGCAGTTTAGCCGTA 6820 Query 442 TAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGA 494 | || || || |||||| |||||||||||| |||| ||| |||||||||| Sbjct 6821 T-GAAGGCGTAGACTTAGGCATGCATGGCTTGATCTCAGAGCTAAGCATATGA 6872 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510313650432