Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Uroleptopsis_20citrina_20[genbank_20GCA_5F001653735.1_202016-05-31] 42,418 sequences; 32,347,234 total letters Query= AAMG01000140.1 Length=336 Score E Sequences producing significant alignments: (Bits) Value seq23800 163 6e-38 >seq23800 Length=1559 Score = 163 bits (180), Expect = 6e-38 Identities = 233/325 (72%), Gaps = 10/325 (3%) Strand=Plus/Minus Query 11 AGGGGGGTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAGCCGAGTGATTCG 70 ||||| |||||||||| |||||| |||| || ||||| || |||||| | | Sbjct 1032 AGGGGAGTGAAATAGATCCTGAAACCGCATGCTTACAAAAAGTAGGAGCCC---GCAAGG 976 Query 71 GTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCAGCGAGGTTAAGG 130 ||||| |||| ||||||| |||||| | | ||| ||| ||| || ||||||| Sbjct 975 GTGACTGCGTACCTTTTGTATAATGGGTCAGCGACTTACAT-TCAGTGGCAAGGTTAACC 917 Query 131 GCTTCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACG-AGTTGGTGGCG 189 | | || ||||| || ||||||||| | || ||||||| ||| | ||| Sbjct 916 GAATAGGGA-----AGCCGTAGCGAAAGCGAGTCCGAATAGGGCGATTCAGTCGCTGGGT 862 Query 190 CTAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACGCGTGATG 249 ||||| ||||||| ||||||| ||| | |||||||||| | ||||||| |||| || Sbjct 861 GTAGACCCGAAACCAGATGATCTATCCATGGCCAGGTTGAAGGCACGGTAACACGTGCTG 802 Query 250 GAGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTGAAAGG 309 |||||||||||| || |||||||| || |||||| | || ||||||||||||| Sbjct 801 GAGGACCGAACCCACTAATGTTGAAAAATTAGGGGATGAGCTGTGGATAGGGGTGAAAGG 742 Query 310 CCAATCAAACTGGGAAATAGCTCGT 334 | || |||| |||||||||| || Sbjct 741 CTAAACAAATCTGGAAATAGCTGGT 717 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 972387357696