Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Uroleptopsis_20citrina_20[genbank_20GCA_5F001653735.1_202016-05-31] 42,418 sequences; 32,347,234 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq39865 268 4e-69 >seq39865 Length=6310 Score = 268 bits (296), Expect = 4e-69 Identities = 240/295 (81%), Gaps = 12/295 (4%) Strand=Plus/Plus Query 393 AATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTG 452 ||||||| | | || ||||||||| |||||||||||||||||||||||| |||||||||| Sbjct 3471 AATGGTTTTTACCGACCCGTCTTGAAACACGGACCAAGGAGTCTAACATATATGCGAGTG 3530 Query 453 TTTGGGTGTC-AAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGAACCCGTGAGGGT 511 | |||| ||||| ||| |||||||||| | ||| || || | | | Sbjct 3531 TGCTGGTGGAGAAACCAACACGCATAATGAAAGTAA---GAGATGCCAAGCGC--AAGCA 3585 Query 512 GCACCATCGACCGATCCTGATGT--CT-TCGGATGGATTTGAGTAAGAGCATAGCTGTTG 568 ||| |||| |||||| || || || | || ||| | ||||||||||| ||||| Sbjct 3586 GCAGCATCAACCGAT---GAGGTTCCTCTGGGGCCTATTCGTGTAAGAGCATATCTGTTA 3642 Query 569 GGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGA 628 ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||| Sbjct 3643 GGACCCGAAAGATGGTGAACTATGCCTGAGTAGGGTGAAGCCAGGGGAAACTCTGGTGGA 3702 Query 629 GGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 |||||| |||||||||| |||||||||||||||||||| |||||||||||||||| Sbjct 3703 GGCTCGTAGCGGTTCTGACGTGCAAATCGATCGTCAAACTTGGGTATAGGGGCGA 3757 Score = 138 bits (152), Expect = 5e-30 Identities = 129/163 (79%), Gaps = 2/163 (1%) Strand=Plus/Plus Query 37 GACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTA 96 || |||||| || |||| | | ||| || |||| |||||| || | ||||||||| |||| Sbjct 3082 GAAGAGTCGGGTAGTTTTGAATTGCTGCCCTAAGTGGGAGATAGACTTCTTCTAAGGCTA 3141 Query 97 AATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTG 156 ||||| | || |||||||||| ||||||| |||| ||||||||||||| |||||| Sbjct 3142 AATATATGTGGGAAACCGATAGCGAACAAGTACTGTGAAGGAAAGATGAAAAGAACTTTG 3201 Query 157 GAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199 ||||||||| |||| || |||||| ||||| | ||||||| Sbjct 3202 AAAAGAGAGTCAAAA--GACTTGAAATCGTTGAGAAGGAAGCG 3242 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079090133900