Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Uroleptopsis_20citrina_20[genbank_20GCA_5F001653735.1_202016-05-31] 42,418 sequences; 32,347,234 total letters Query= AAMG01000370.1 Length=180 Score E Sequences producing significant alignments: (Bits) Value seq23800 100 3e-19 >seq23800 Length=1559 Score = 100 bits (110), Expect = 3e-19 Identities = 136/183 (74%), Gaps = 14/183 (8%) Strand=Plus/Minus Query 8 GGTGGATGCCTAGGCTCTCGGAGGCGAAGAAGGACGTGATAAGCTGCGAAAAGCTACGGG 67 ||||||||||| ||| | |||||| ||| ||||||||| |||||| ||||| |||| Sbjct 1496 GGTGGATGCCTTGGCGATGATAGGCGACGAAAGACGTGATAGCCTGCGATAAGCTTCGGG 1437 Query 68 GA-TTGGCACATACGAATTGATCCGTAGATATCCGAATGGGG----CAACCCGATA---T 119 || ||||| ||| | |||||||| |||| || |||||||| | ||||| | | Sbjct 1436 GAGCTGGCAAATAAGCTTTGATCCGGAGATTTCTGAATGGGGAAACCCACCCGCAAGGGT 1377 Query 120 ATTGGAGA-TATAT-CATAACGCTAGGCGTTAGGCGAACGTGGGGAACTGAAACATCTAA 177 || | | | | || |||| | || ||| | |||||| ||| |||||||||||||||| Sbjct 1376 ATCGCATACTGAATACATA--GGTATGCG--AAGCGAACCTGGAGAACTGAAACATCTAA 1321 Query 178 GTA 180 ||| Sbjct 1320 GTA 1318 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476604071258