Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Uroleptopsis_20citrina_20[genbank_20GCA_5F001653735.1_202016-05-31] 42,418 sequences; 32,347,234 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq39865 354 1e-95 >seq39865 Length=6310 Score = 354 bits (392), Expect = 1e-95 Identities = 239/265 (90%), Gaps = 3/265 (1%) Strand=Plus/Minus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 5797 TCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTA 5738 Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150 |||| ||||||||||||| || ||| |||||||||||| ||||||||||||||||| Sbjct 5737 TTAGCGGGTGAACAATCCGACACTTGGTGAATTCTGCTTCACAATGATAGGAAGAGCCGA 5678 Query 151 CATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCC 210 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 5677 CATCGAAGAATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCC 5618 Query 211 CTGTGGTAACTTTTCTGGCACCTCTAGCCTCA-AATTTCGAGGGACTAAAGGATCGATAG 269 ||||||||||||||||| |||||||||| | | | ||| | || |||||||||||||| Sbjct 5617 CTGTGGTAACTTTTCTGACACCTCTAGCTTAACACTTTTAAAGG--TAAAGGATCGATAG 5560 Query 270 GCCACACTTTCATGGTTTGTATTCA 294 |||| ||||| ||||||||||| Sbjct 5559 GCCATGCTTTCGCAGTTTGTATTCA 5535 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854037580608