Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Uroleptopsis_20citrina_20[genbank_20GCA_5F001653735.1_202016-05-31] 42,418 sequences; 32,347,234 total letters Query= AAMG01001213.1 Length=600 Score E Sequences producing significant alignments: (Bits) Value seq23800 342 2e-91 >seq23800 Length=1559 Score = 342 bits (378), Expect = 2e-91 Identities = 409/547 (75%), Gaps = 20/547 (4%) Strand=Plus/Plus Query 46 ACTTCCCGGCATTCGGAGTTTGGTTGATTTCGGTAAG-CTTGTGGGCCCCCTAGACCATC 104 |||| | || |||||||||||| | || |||||| | | |||||||| | || Sbjct 599 ACTTGCGGGTATTCGGAGTTTGCCATAGTTTGGTAAGTCGCCATGACCCCCTAG-CTATA 657 Query 105 -CAGTGCTCTACCTCCGGGAAGAAACACGCGACGCTGCACCTAAATGCATTTCGGGGAGA 163 |||||||||||| || | | | || || || || |||||||| |||||| |||| Sbjct 658 ACAGTGCTCTACCCCCCGCA-GTAATACTTGAGGCACTACCTAAATAGTTTTCGGAGAGA 716 Query 164 ACCAGCTATCACGAAGTTTGATTGGCCTTTCACCCCTATCCACAGGTCATCCCCTCAGTT 223 ||||||||| | | |||| || ||||||||||||||||||||| ||||||||| | || Sbjct 717 ACCAGCTATTTCCAGATTTGTTTAGCCTTTCACCCCTATCCACAGCTCATCCCCTAATTT 776 Query 224 TTCAACCTAAGTGGGTTCGGTCCTCCACGCGGTCTTACCCGCGCTTCAACCTGCCCATGG 283 |||||| | |||||||||||||||||| || ||||| |||||||||| |||||| Sbjct 777 TTCAACATTAGTGGGTTCGGTCCTCCAGCACGTGTTACCGTGCCTTCAACCTGGCCATGG 836 Query 284 ATAGATCACTTCGCTTCGGGTCTTGATCGTGCCACTCATACGCCCTATTCGGACTCGCTT 343 |||||||| | | ||||||||| | | || ||| | |||||||||||||||||||| Sbjct 837 ATAGATCATCTGGTTTCGGGTCTACACCCAGCGACTGAATCGCCCTATTCGGACTCGCTT 896 Query 344 TCGCTACGGCTACCCCACACGGGTTAACCTCGCGACACAACGCAAACTCGCAGGCTCATT 403 ||||||||||| ||| | | ||||||||| || || || | || |||| | | |||| Sbjct 897 TCGCTACGGCTTCCCTATTC-GGTTAACCTTGCCACTGAATG-TAAGTCGCTGACCCATT 954 Query 404 CTTCAAAAGGCACGCCGTCACCTGGTACCTAAAAGGCACTTCAGCTCCGACGGATTGTAG 463 | ||||||| |||| ||||| ||| || ||||| || ||||| Sbjct 955 ATACAAAAGGTACGCAGTCAC------CCT----TGC----GGGCTCCTACTTTTTGTAA 1000 Query 464 GCACATGGTTTCAGGTACTATTTCACTCCCCGCCAGGGGTACTTTTCACCTTTCCCTCAC 523 ||| ||||||||| |||||||||||||| || ||||| |||||| |||||||||||| Sbjct 1001 GCATGCGGTTTCAGGATCTATTTCACTCCCCTCCCGGGGTTCTTTTCGCCTTTCCCTCAC 1060 Query 524 GGTACTTGTCCGCTATCGGTCACCAAGGAGTATTTAGGCTTAACGGGTGGTCCCGCCAGA 583 |||||| || | ||||||||| | |||||||||| ||| || ||||||| ||| | Sbjct 1061 GGTACTGGTTCACTATCGGTCGATGATGAGTATTTAGCCTTGGAGGATGGTCCCCCCATA 1120 Query 584 TTCACAC 590 |||| || Sbjct 1121 TTCAGAC 1127 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1816829010432