Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Uroleptopsis_20citrina_20[genbank_20GCA_5F001653735.1_202016-05-31] 42,418 sequences; 32,347,234 total letters Query= AAMG01001291.1 Length=420 Score E Sequences producing significant alignments: (Bits) Value seq23800 430 3e-118 >seq23800 Length=1559 Score = 430 bits (476), Expect = 3e-118 Identities = 354/416 (85%), Gaps = 15/416 (4%) Strand=Plus/Plus Query 4 CCGATCCACAGGTCATTCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAG 63 || |||||||| |||| || |||| ||||||||| |||| ||||||||||||||| | Sbjct 751 CCTATCCACAGCTCATCCC-CTAA-TTTTTCAACATTAGTGGGTTCGGTCCTCCAGCACG 808 Query 64 TAGTTACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTTC 123 | |||||| |||| ||||||| |||| ||||||||| | ||||| |||||||| | Sbjct 809 T-GTTACCGTGCCTT-CAACCTGGCCAT-GGATAGATCATCTGGTTT-CGGGTCTACA-C 863 Query 124 CCAGCGACTAGA-CGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCCCCTATTCGGTTAA 182 ||||||||| | ||||||| | |||||||||| ||||||| || |||||||||||||| Sbjct 864 CCAGCGACTGAATCGCCCTATTCGGACTCGCTTT-CGCTACGGCTTCCCTATTCGGTTAA 922 Query 183 GCTTTGCCACTGAAAATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAACA 242 ||| ||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 923 CCTT-GCCACTGAATGTAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCTT-- 979 Query 243 AAGTGGGCTCCCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCG 302 | ||||||| ||| ||||| |||| |||||||||||||||||||||||||||| ||| Sbjct 980 --GCGGGCTCCTACTTTTTGTAAGCATGCGGTTTCAGGATCTATTTCACTCCCCTC-CCG 1036 Query 303 GGGTTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTA 362 |||||||||||||||||||||||||||||| |||||||||||||| | | |||||||| Sbjct 1037 GGGTTCTTTTCGCCTTTCCCTCACGGTACTGGTTCACTATCGGTCGATGATGAGTATTTA 1096 Query 363 GCCTTGGAGGATGGTCCCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCCTACT 418 |||||||||||||||||||||||||||||||| ||||||||||| ||| | |||| Sbjct 1097 GCCTTGGAGGATGGTCCCCCCATATTCAGACAGGGTTTCTCGTGCCCCGCCTTACT 1152 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1241073338112