Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Uroleptopsis_20citrina_20[genbank_20GCA_5F001653735.1_202016-05-31] 42,418 sequences; 32,347,234 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq39865 122 1e-25 seq27648 122 1e-25 seq36064 77.0 4e-12 >seq39865 Length=6310 Score = 122 bits (134), Expect = 1e-25 Identities = 87/99 (88%), Gaps = 2/99 (2%) Strand=Plus/Minus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69 ||||||||||| || || | |||||||||||||||||||||||||||||||| |||| Sbjct 1421 AAACCAACAAAGGAG--ACCAAAGTCCTATTCTATTATTCCATGCTAATGTATTCAGGCG 1364 Query 70 TAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAA 108 | |||||| || |||||||||||||||||||||||||| Sbjct 1363 CATGCCTGCCTTAAACACTCTAATTTTCTCAAGGTAAAA 1325 >seq27648 Length=428 Score = 122 bits (134), Expect = 1e-25 Identities = 87/99 (88%), Gaps = 2/99 (2%) Strand=Plus/Plus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69 ||||||||||| || || | |||||||||||||||||||||||||||||||| |||| Sbjct 42 AAACCAACAAAGGAG--ACTAAAGTCCTATTCTATTATTCCATGCTAATGTATTCCGGCG 99 Query 70 TAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAA 108 ||||||| | ||||||||||||||||||||||||||| Sbjct 100 CTAGCCTGCCTGGAACACTCTAATTTTCTCAAGGTAAAA 138 >seq36064 Length=616 Score = 77.0 bits (84), Expect = 4e-12 Identities = 62/75 (83%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 33 GTCCTATTCTATTATTCCATGCTAATGTATTCGGGCGTAAGCCTGCTTTGAACACTCTAA 92 ||||| ||||||||||||||||| |||| ||| |||||||| | ||||||||| | Sbjct 256 GTCCTCTTCTATTATTCCATGCTGGACGATTCAGGCCCAAGCCTGCCTGGAACACTCTCA 315 Query 93 TTTTCTCAAGGTAAA 107 ||| ||||||||||| Sbjct 316 TTTGCTCAAGGTAAA 330 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 594955417812