Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Uroleptopsis_20citrina_20[genbank_20GCA_5F001653735.1_202016-05-31] 42,418 sequences; 32,347,234 total letters Query= AAMG01002193.1 Length=560 Score E Sequences producing significant alignments: (Bits) Value seq23800 497 4e-138 >seq23800 Length=1559 Score = 497 bits (550), Expect = 4e-138 Identities = 456/565 (81%), Gaps = 16/565 (3%) Strand=Plus/Minus Query 2 CGAGTCCGAACAGGGCGA--CAGTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCCA 59 |||||||||| ||||||| ||||||||||||||||||||||||||| ||||||| ||| Sbjct 893 CGAGTCCGAATAGGGCGATTCAGTCGCTGGGTGTAGACCCGAAACCAGATGATCTATCCA 834 Query 60 TGGCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAA 119 |||||||| |||||| |||||||||| ||||||| ||||||||||||||||||||||| Sbjct 833 TGGCCAGGTTGAAGGCACGGTAACACGTGCTGGAGGACCGAACCCACTAATGTTGAAAAA 774 Query 120 TTAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTCT 179 |||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||| Sbjct 773 TTAGGGGATGAGCTGTGGATAGGGGTGAAAGGCTAAACAAATCTGGAAATAGCTGGTTCT 714 Query 180 CTCCGAAAACTATTTAGGTAGTGCCTCAAGTATCACCATCGGGGGTAGAGCACTGTTATG 239 ||||||||||||||||||||||||||||||||| || ||||||||||||||||||| Sbjct 713 CTCCGAAAACTATTTAGGTAGTGCCTCAAGTATTACTGCGGGGGGTAGAGCACTGTTATA 654 Query 240 GCTAGGGGGTCATTGCGACTTACCAAACCATTGCAAACTCCGAATGCGCATCAGTTTTAC 299 ||||||||||||| |||||||||||||| || ||||||||||||| | | || ||| Sbjct 653 GCTAGGGGGTCATGGCGACTTACCAAACTATGGCAAACTCCGAATACCCGCAAG---TAC 597 Query 300 CGC--GGGAGTGAGGGCA-TGGGTGCTAAGGTCCGTGCCCGAGAGGAGAAGAATCCGGAC 356 || ||||| || ||| ||| ||||| ||||| | | ||||| || || || ||| Sbjct 596 AGCTTGGGAGACAGAGCACCGGGGGCTAACGTCCGGACTCAAGAGGGAAACAACCCAGAC 537 Query 357 TATCAGCTAAGGCCCCGAAATGACAGCTAAGTTAAACTAACGAAGTCTGATTGCTAAGAC 416 ||||||||| |||| ||| | ||||||| | |||||||| || || |||| Sbjct 536 CGCCAGCTAAGGTCCCG-AATTATCGCTAAGTGGGA--AACGAAGTGGGAAGGCATAGAC 480 Query 417 AGCTAGGATGTTGGCTTGGAAGCAGCCATTCATTTAAAGAGTGCGTAACAGCTCACTAGT 476 || |||| |||||||| |||||||||| || |||||||| |||||| |||||||| | Sbjct 479 AGTCAGGAGGTTGGCTTAGAAGCAGCCA-TCCTTTAAAGAAAGCGTAATAGCTCACTGAT 421 Query 477 CGAGGAGTCGGGCGTGGATAAT-AATCGGGTATTAAGTTGTCTACCGAAGCAGTGG--GA 533 |||| ||| ||| ||| || | |||| |||| | ||||||||| | || | Sbjct 420 CGAGTCGTCCTGCGCGGAAGATGTAACGGG-GCTAAGCAATATACCGAAGCTGCGGATGC 362 Query 534 TCATTTATATGATCGGTAGGGGAGC 558 ||||||| || |||||| |||| Sbjct 361 ACATTTATGTGCATGGTAGGAGAGC 337 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1688883305472