Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Uroleptopsis_20citrina_20[genbank_20GCA_5F001653735.1_202016-05-31] 42,418 sequences; 32,347,234 total letters Query= AAMG01002194.1 Length=319 Score E Sequences producing significant alignments: (Bits) Value seq23800 268 2e-69 >seq23800 Length=1559 Score = 268 bits (296), Expect = 2e-69 Identities = 218/263 (83%), Gaps = 1/263 (0%) Strand=Plus/Minus Query 1 AGTGCACATGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATA 60 || ||| ||||||||||||||||||| | |||||| ||| ||||| |||| ||||||| Sbjct 1505 AGAGCATGTGGTGGATGCCTTGGCGATGATAGGCGACGAAAGACGTGATAGCCTGCGATA 1446 Query 61 AGCTGCGGGGAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGC 120 |||| ||||||| ||||| | |||||||||| ||||||| |||||||||||||| | Sbjct 1445 AGCTTCGGGGAGCTGGCAAATAAGCTTTGATCCGGAGATTTCTGAATGGGGAAACCCACC 1386 Query 121 CCTTTGGGTCATTGCATGCTGAATACATAGGTATGCAAAGCGAACGCGGCGAACTGAAAC 180 | |||| || |||| |||||||||||||||||| |||||||| || |||||||||| Sbjct 1385 CGCAAGGGT-ATCGCATACTGAATACATAGGTATGCGAAGCGAACCTGGAGAACTGAAAC 1327 Query 181 ATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAAAT 240 ||||||||| | ||||||||| ||||||||||||||| |||||||||||||||||||| Sbjct 1326 ATCTAAGTACCCAGAGGAAAAGACATCAACCGAGATTCCGAAAGTAGTGGCGAGCGAAAT 1267 Query 241 GGGATGAGCCTTTACGAGATAGT 263 ||| |||||| | |||||| Sbjct 1266 CGGAACAGCCTTCTAGTGATAGT 1244 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 918010433088