Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Uroleptopsis_20citrina_20[genbank_20GCA_5F001653735.1_202016-05-31] 42,418 sequences; 32,347,234 total letters Query= NC_029107.1 Length=41941 Score E Sequences producing significant alignments: (Bits) Value seq36599 143 7e-30 >seq36599 Length=799 Score = 143 bits (158), Expect = 7e-30 Identities = 286/411 (70%), Gaps = 22/411 (5%) Strand=Plus/Minus Query 22381 CATCGAGGACGACAGCTACGGCGTCTACAAACCGATCATCGCGCAGATGGG--GCAGGAC 22438 ||||||||||||| ||||||||||| ||||| ||| | ||||||| |||| | Sbjct 444 CATCGAGGACGACCAGTACGGCGTCTATGGCCCGATGTTCGAGGAGATGGGACGCAG--C 387 Query 22439 GCCAAAGAACATCCCGATGAGCTGGTGTGGGGCCTGTGGAAGCAAGGCTTCAAC--GCTG 22496 ||||| || || ||||| || || | |||| ||| | |||||| | || | Sbjct 386 GCCAACGAGTTCCCTGATGAACTCGTTTTCAGCCTCCTCAAGGAGGGCTTCTCCAAGCCG 327 Query 22497 TTTGCTACGACGGTCAGTATTTCTTCGATACCGACCACCCCGTCATCAAGCCGGGCGG-- 22554 | | | ||||| ||| | |||||||| || || || || |||| ||| ||| Sbjct 326 TGTTTT--GACGGGCAGAACTTCTTCGACACTGAGCATCCGGTCAGCAATGAAAACGGAG 269 Query 22555 CGGCACCACCTCCGTGTCCAACTTCCAGGGGGGCACCGGTCCCGCCTGGTTCCTGTTGGA 22614 ||| | | | ||||| ||| | |||| |||| |||||| |||||||||||| |||| Sbjct 268 CGGAAGGGCTT--GTGTCGAACATGCAGGACGGCAGCGGTCCTGCCTGGTTCCTGATGGA 211 Query 22615 TACCACGCGCATGGTCAAGCCGATGATTCACCAGGTGCG-CAAGCCGTACACCTTCGTGT 22673 |||| ||||| | |||||||| | || |||||| ||| ||||| | ||||| | Sbjct 210 TACCTCGCGCGCGATCAAGCCGTTAATCTACCAGGAGCGAAAAGCCCCGC-GCTTCGCGG 152 Query 22674 CCATGGACAAGGAGGACGACGAAAACGTGTTC--AACCGCAAGGAATTCATCTACGGCGT 22731 |||| || || |||||| |||| ||| ||||| | ||||| |||| ||| | Sbjct 151 GGGTGGATAATGACAGCGACGACTACGTCTTCCGAACCGGCA--AATTCCTCTATGGCAT 94 Query 22732 GG--ACGCCCGGTCGAACGTCGGCTTTGGGCTTTGGCAACTGGCCTACGCC 22780 || || | |||| |||||||| || ||||| ||||| |||||| |||| Sbjct 93 GGAAACACGCGGT--AACGTCGGTTTCGGGCTGTGGCAGTTGGCCTTCGCC 45 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 134022057224748